Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1035.Seq
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 32 0.088
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 32 0.088
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.15
U00066-7|AAY86272.1| 80|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z78019-2|CAB01451.1| 347|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z81070-4|CAB03003.2| 474|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 26 5.8
U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protei... 26 5.8
U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protei... 26 5.8
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 26 5.8
AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-... 26 5.8
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 25 7.6
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 25 7.6
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 31.9 bits (69), Expect = 0.088
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PVHPAVAALMDTVPTVVMEVYHP-PAVPVTLMQAQTLQDP 168
P+HP +AA+ T +M V HP P +P+ +Q+ Q P
Sbjct: 203 PMHPQMAAMAATFNPGLMVVSHPVPVIPIPSNSSQSSQPP 242
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 31.9 bits (69), Expect = 0.088
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PVHPAVAALMDTVPTVVMEVYHP-PAVPVTLMQAQTLQDP 168
P+HP +AA+ T +M V HP P +P+ +Q+ Q P
Sbjct: 203 PMHPQMAAMAATFNPGLMVVSHPVPVIPIPSNSSQSSQPP 242
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.1 bits (67), Expect = 0.15
Identities = 20/82 (24%), Positives = 25/82 (30%)
Frame = +1
Query: 7 PAVPVTLMQAQTWQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVA 186
P P T+ T P P T PT + P P T+ T P P
Sbjct: 263 PTTPTTMKSTPT--TPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPT--TPTTPTTM 318
Query: 187 ALMDTVPXVVMEVYHSPAVPVT 252
T P + +P P T
Sbjct: 319 KSTPTTPTTPTTMKSTPTTPTT 340
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/67 (23%), Positives = 20/67 (29%)
Frame = +1
Query: 52 PVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVYH 231
P P T PT + P P T+ T P P T P +
Sbjct: 162 PTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPT--TPTTPTTMKSTPTTPTTPTTMKS 219
Query: 232 SPAVPVT 252
+P P T
Sbjct: 220 TPTTPTT 226
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/83 (22%), Positives = 25/83 (30%)
Frame = +1
Query: 7 PAVPVTLMQAQTWQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVA 186
P P T+ T P P T PT + P P T+ P
Sbjct: 377 PTTPTTMKSTPT--TPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST--------PTTP 426
Query: 187 ALMDTVPXVVMEVYHSPAVPVTL 255
M + P + SP P T+
Sbjct: 427 TTMKSTPTTPSTMKSSPTTPTTM 449
>U00066-7|AAY86272.1| 80|Caenorhabditis elegans Hypothetical
protein R12B2.8 protein.
Length = 80
Score = 29.1 bits (62), Expect = 0.62
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 87 CIHKCCYRRMYWILP 43
C ++CCYR YW+ P
Sbjct: 45 CDNECCYRLRYWVYP 59
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +1
Query: 4 PPAVPVTLMQAQTWQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAV 183
PP PV ++ T ++P VA +M PP PV + T +DP
Sbjct: 490 PPNPPVVIVDPATSEEPNDTTVAQVM------------PPNPPVVISGPATAKDPSTTTS 537
Query: 184 AALMDTVPXVVM 219
++ T P VV+
Sbjct: 538 DPVVQTNPPVVI 549
>Z78019-2|CAB01451.1| 347|Caenorhabditis elegans Hypothetical
protein ZK863.5 protein.
Length = 347
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -3
Query: 156 GLCLHQCYWNC----RWMIHFHHHSRNCIHKCCYRRMYWIL 46
GLC + W+C +HFH +S + + C R Y +L
Sbjct: 77 GLCKYLSEWSCFLGFSLQLHFHSYSFHLLILCFIFRCYVLL 117
>Z81070-4|CAB03003.2| 474|Caenorhabditis elegans Hypothetical
protein F26E4.5 protein.
Length = 474
Score = 25.8 bits (54), Expect = 5.8
Identities = 7/32 (21%), Positives = 17/32 (53%)
Frame = -3
Query: 252 CYWNXR*MIHFHHDXRNCIHKCCYRRMXWILQ 157
C+ N ++ +HH R ++K + W+++
Sbjct: 154 CFENISDLVRYHHQTRASVYKSGIKLFSWVVR 185
Score = 25.8 bits (54), Expect = 5.8
Identities = 7/31 (22%), Positives = 17/31 (54%)
Frame = -3
Query: 138 CYWNCRWMIHFHHHSRNCIHKCCYRRMYWIL 46
C+ N ++ +HH +R ++K + W++
Sbjct: 154 CFENISDLVRYHHQTRASVYKSGIKLFSWVV 184
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 37 QTWQDPVH--PAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTL 159
QTW+DP H P A D P V+EV A ++Q + L
Sbjct: 107 QTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVL 149
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 37 QTWQDPVH--PAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTL 159
QTW+DP H P A D P V+EV A ++Q + L
Sbjct: 221 QTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVL 263
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 37 QTWQDPVH--PAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTL 159
QTW+DP H P A D P V+EV A ++Q + L
Sbjct: 222 QTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVL 264
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 37 QTWQDPVH--PAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTL 159
QTW+DP H P A D P V+EV A ++Q + L
Sbjct: 153 QTWEDPNHVVPDTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVL 195
>U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protein
11, isoform b protein.
Length = 106
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +1
Query: 46 QDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEV 225
Q PV P + P ++ V P VPV Q + P +P+V ++ P +
Sbjct: 31 QMPVAPTPIVVAQPPPPMI--VPQPQIVPVVQQIMQPMVQPIYPSVQPIV--YPTATPII 86
Query: 226 YHSPAV 243
Y P V
Sbjct: 87 YTQPEV 92
>U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protein
11, isoform a protein.
Length = 232
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +1
Query: 46 QDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEV 225
Q PV P + P ++ V P VPV Q + P +P+V ++ P +
Sbjct: 157 QMPVAPTPIVVAQPPPPMI--VPQPQIVPVVQQIMQPMVQPIYPSVQPIV--YPTATPII 212
Query: 226 YHSPAV 243
Y P V
Sbjct: 213 YTQPEV 218
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +1
Query: 46 QDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDT 201
Q+ + +A T+ TV M PP P T T P + L T
Sbjct: 1128 QNLIGSMIAYRESTIDTVSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPST 1179
>AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-11
protein.
Length = 232
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = +1
Query: 46 QDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEV 225
Q PV P + P ++ V P VPV Q + P +P+V ++ P +
Sbjct: 157 QMPVGPTPIVVAQPPPPMI--VPQPQIVPVVQQIMQPMVQPIYPSVQPIV--YPTATPII 212
Query: 226 YHSPAV 243
Y P V
Sbjct: 213 YTQPEV 218
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 738 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 797
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 798 RHTKQKPARIIVYR 811
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 735 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 794
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 795 RHTKQKPARIIVYR 808
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 738 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 797
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 798 RHTKQKPARIIVYR 811
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 735 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 794
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 795 RHTKQKPARIIVYR 808
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 740 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 799
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 800 RHTKQKPARIIVYR 813
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 743 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 802
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 803 RHTKQKPARIIVYR 816
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 740 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 799
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 800 RHTKQKPARIIVYR 813
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMDTVPXVVMEVY 228
D HP A + +P+V V + +P + +Q +V L+D + ++ Y
Sbjct: 743 DVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFY 802
Query: 229 -HSPAVPVTLCXHR 267
H+ P + +R
Sbjct: 803 RHTKQKPARIIVYR 816
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 94 TVVMEVYHPPAVPVTLMQAQTLQDPXHPAVAALMD---TVPXVVMEVYHSP 237
T ++ P A+P+ ++ Q+ +DP PA + T P + + Y P
Sbjct: 523 TTIITTVKPNALPIAIVAKQSEKDPACPAEWTQFNTNATAPALCFKRYEKP 573
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 153 LCLHQCYWNCRWMIHFHHHSRNCIHKC 73
LC CY C+++I H +R H C
Sbjct: 926 LCSQVCY-TCKFLIESLHSARRVEHSC 951
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,878,093
Number of Sequences: 27780
Number of extensions: 107860
Number of successful extensions: 291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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