Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1034.Seq
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006141-1|AAH06141.1|  865|Homo sapiens EPB41L3 protein protein.      30   5.8  
AB023204-1|BAA76831.1| 1115|Homo sapiens KIAA0987 protein protein.     30   5.8  
AF069072-1|AAC79806.1|  503|Homo sapiens putative lung tumor sup...    29   7.6  

>BC006141-1|AAH06141.1|  865|Homo sapiens EPB41L3 protein protein.
          Length = 865

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 315 TLVTPDRKVEDSKPLKPREEMKPRG*QEIMPISAVK 422
           T VTP++K E+ +     EE K R  +E+ PISA++
Sbjct: 484 TTVTPEKKAEEERD---EEEDKRRKGEEVTPISAIR 516


>AB023204-1|BAA76831.1| 1115|Homo sapiens KIAA0987 protein protein.
          Length = 1115

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 315 TLVTPDRKVEDSKPLKPREEMKPRG*QEIMPISAVK 422
           T VTP++K E+ +     EE K R  +E+ PISA++
Sbjct: 494 TTVTPEKKAEEERD---EEEDKRRKGEEVTPISAIR 526


>AF069072-1|AAC79806.1|  503|Homo sapiens putative lung tumor
           suppressor protein.
          Length = 503

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 315 TLVTPDRKVEDSKPLKPREEMKPRG*QEIMPISAVK 422
           T VTP++K E+ +     EE K R  +E+ PISA++
Sbjct: 375 TTVTPEKKAEEERD---EEEDKRRKGEEVTPISAIQ 407


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,549,626
Number of Sequences: 237096
Number of extensions: 1214508
Number of successful extensions: 2199
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2199
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)