Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1034.Seq
         (528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118475-1|AAM49844.1|  331|Drosophila melanogaster GM14972p pro...    28   6.8  
AF185647-1|AAF03835.1|  345|Drosophila melanogaster DNA (5-cytos...    28   6.8  
AE014134-2157|AAF53163.1|  345|Drosophila melanogaster CG10692-P...    28   6.8  
AE014134-2156|ABI31309.1|  345|Drosophila melanogaster CG10692-P...    28   6.8  
BT028790-1|ABI34171.1|  806|Drosophila melanogaster IP11226p pro...    28   9.0  
AE014298-1857|AAF48237.1|  334|Drosophila melanogaster CG4187-PA...    28   9.0  

>AY118475-1|AAM49844.1|  331|Drosophila melanogaster GM14972p
           protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 460 GWPRPSNRKRITCFTAEIGII-SCQPLGFISSRGFNGFESSTLRS 329
           G  R +  KR    T   G+I  CQ L +I      GFESS  R+
Sbjct: 71  GLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARN 115


>AF185647-1|AAF03835.1|  345|Drosophila melanogaster DNA
           (5-cytosine) methyltransferasehomolog protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 460 GWPRPSNRKRITCFTAEIGII-SCQPLGFISSRGFNGFESSTLRS 329
           G  R +  KR    T   G+I  CQ L +I      GFESS  R+
Sbjct: 85  GLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARN 129


>AE014134-2157|AAF53163.1|  345|Drosophila melanogaster CG10692-PA,
           isoform A protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 460 GWPRPSNRKRITCFTAEIGII-SCQPLGFISSRGFNGFESSTLRS 329
           G  R +  KR    T   G+I  CQ L +I      GFESS  R+
Sbjct: 85  GLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARN 129


>AE014134-2156|ABI31309.1|  345|Drosophila melanogaster CG10692-PC,
           isoform C protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 460 GWPRPSNRKRITCFTAEIGII-SCQPLGFISSRGFNGFESSTLRS 329
           G  R +  KR    T   G+I  CQ L +I      GFESS  R+
Sbjct: 85  GLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARN 129


>BT028790-1|ABI34171.1|  806|Drosophila melanogaster IP11226p
           protein.
          Length = 806

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 315 TLVTPDRKVEDSKPLKPREEMKPR 386
           TLVT DR +  ++PLKPR+  K R
Sbjct: 563 TLVTWDRLMSVTRPLKPRDTEKVR 586


>AE014298-1857|AAF48237.1|  334|Drosophila melanogaster CG4187-PA
           protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 315 TLVTPDRKVEDSKPLKPREEMKPR 386
           TLVT DR +  ++PLKPR+  K R
Sbjct: 91  TLVTWDRLMSVTRPLKPRDTEKVR 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,290,016
Number of Sequences: 53049
Number of extensions: 378360
Number of successful extensions: 818
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)