Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1031.Seq
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 27 0.11
AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding prote... 22 3.1
AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-bind... 22 3.1
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 22 4.1
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 21 5.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 9.4
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.4
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 27.1 bits (57), Expect = 0.11
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 14 GGLGTTNTSCV-QIRIANK*TLN*KDKNQVRFSSLASFRNQRDAKFIGYAKFICIIFMSF 190
G +G T+ +C + R+ ++ + KN+ ++ + +R FI F + +
Sbjct: 318 GLVGDTSLACWNENRLLDRRNIEVVAKNKETLQAITGLKVKRRISFILVHGFP----LEY 373
Query: 191 NFV*AVSEKIRRIIYFYD 244
+V AVS +I+++IY +D
Sbjct: 374 EYVLAVSNRIQKVIYGFD 391
>AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding protein
ASP2 protein.
Length = 142
Score = 22.2 bits (45), Expect = 3.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 445 GCISACLMKXVSVV 486
GC+ AC+MK + ++
Sbjct: 67 GCLKACVMKRIEML 80
>AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-binding
protein ASP2 protein.
Length = 142
Score = 22.2 bits (45), Expect = 3.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 445 GCISACLMKXVSVV 486
GC+ AC+MK + ++
Sbjct: 67 GCLKACVMKRIEML 80
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 445 GCISACLMKXVSVVN 489
GCI ACL ++++N
Sbjct: 54 GCIEACLFHRLALMN 68
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 307 DISLTLSIRQRLASCVKXXXXXIKVNNSSDFFRHSLNEIKTH 182
D+ L SIR+ + CV K + F R ++ +K H
Sbjct: 87 DMDLKDSIRKIIRQCVDNAKNEDKCLTAQKFSRCVIDYVKFH 128
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 400 KVHLTKSPLKFTNHHGCISACLMKXVSVVN 489
++ L F N+ GC AC+ + V+N
Sbjct: 55 RIKLINEEENFRNY-GCFLACIWQQTGVMN 83
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -2
Query: 195 KLKLINIIQMNFA*PINFASLWFRNEARELNRTW 94
KLKL +I +N I +LW + W
Sbjct: 59 KLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRW 92
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -2
Query: 195 KLKLINIIQMNFA*PINFASLWFRNEARELNRTW 94
KLKL +I +N I +LW + W
Sbjct: 59 KLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRW 92
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -2
Query: 195 KLKLINIIQMNFA*PINFASLWFRNEARELNRTW 94
KLKL +I +N I +LW + W
Sbjct: 55 KLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKW 88
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 438 PSWMYKCVPDEG 473
P +YKCV D G
Sbjct: 165 PGVVYKCVSDNG 176
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 242 DDYLNFHTRSESLPDTEC**NIIQTFYSLDH 334
+DY FH E P+++ ++I T +D+
Sbjct: 282 NDYYAFHFEGEKGPNSQGPSSVIDTNTGVDY 312
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/33 (24%), Positives = 14/33 (42%)
Frame = -2
Query: 192 LKLINIIQMNFA*PINFASLWFRNEARELNRTW 94
LKL +I+MN + ++W + W
Sbjct: 65 LKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLKW 97
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,957
Number of Sequences: 438
Number of extensions: 2338
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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