Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1031.Seq
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17750.1 68416.m02265 protein kinase family protein contains ... 27 7.0
At1g78920.1 68414.m09201 vacuolar-type H+-translocating inorgani... 27 7.0
At1g73460.1 68414.m08504 protein kinase family protein contains ... 27 7.0
At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 27 7.0
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 27 9.3
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 27 9.3
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 27 9.3
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 27 9.3
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 27 9.3
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 27 9.3
At1g67370.1 68414.m07669 meiotic asynaptic mutant 1 (ASY1) ident... 27 9.3
>At3g17750.1 68416.m02265 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 1138
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 235 VNNSSDFFRHSLNEIKTHKY 176
+ N+ DFF SL+EIK KY
Sbjct: 858 IKNNKDFFDQSLDEIKLLKY 877
>At1g78920.1 68414.m09201 vacuolar-type H+-translocating inorganic
pyrophosphatase (AVPL1) identical to vacuolar-type
H+-translocating inorganic pyrophosphatase GI:6901676
from [Arabidopsis thaliana]
Length = 802
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 181 KYNTNELRVTNKFCISLVSKRGKRTKPDLVFVFLI 77
K N L + FC + G T P +VFVF +
Sbjct: 40 KLNVRVLSIILLFCFGAIFYMGASTSPIIVFVFTV 74
>At1g73460.1 68414.m08504 protein kinase family protein contains
protein kinase domain Pfam:PF00069
Length = 1169
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 235 VNNSSDFFRHSLNEIKTHKY 176
+ N+ DFF SL+EIK KY
Sbjct: 889 IKNNKDFFDQSLDEIKLLKY 908
>At1g73450.1 68414.m08503 protein kinase, putative similar to
nuclear serine/threonine protein kinase GI:3582644 from
[Rattus norvegicus]
Length = 1152
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 235 VNNSSDFFRHSLNEIKTHKY 176
+ N+ DFF SL+EIK KY
Sbjct: 872 IKNNKDFFDQSLDEIKLLKY 891
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal
domain-containing protein similarity to
TETRATRICOPEPTIDE REPEAT PROTEIN 2 , human,
SWISSPROT:TTC2_HUMAN; contains Pfam profiles PF00226:
DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 232 NNSSDFFRHSLNEIKTHKYNTN 167
N+S D F+ S+NE K H +N++
Sbjct: 241 NHSGDSFQGSVNEKKVHDFNSS 262
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 64 IRYSDLHAGCIRCAKXAST 8
IR+ D++A C+R K AST
Sbjct: 618 IRFWDINASCVRAVKGAST 636
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 64 IRYSDLHAGCIRCAKXAST 8
IR+ D++A C+R K AST
Sbjct: 620 IRFWDINASCVRAVKGAST 638
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 64 IRYSDLHAGCIRCAKXAST 8
IR+ D++A C+R K AST
Sbjct: 620 IRFWDINASCVRAVKGAST 638
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 64 IRYSDLHAGCIRCAKXAST 8
IR+ D++A C+R K AST
Sbjct: 620 IRFWDINASCVRAVKGAST 638
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 64 IRYSDLHAGCIRCAKXAST 8
IR+ D++A C+R K AST
Sbjct: 620 IRFWDINASCVRAVKGAST 638
>At1g67370.1 68414.m07669 meiotic asynaptic mutant 1 (ASY1)
identical to meiotic asynaptic mutant 1 [Arabidopsis
thaliana] GI:7939627; contains Pfam profiles PF02301:
DNA-binding HORMA domain, PF04433: SWIRM domain
Length = 596
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 408 FDEITPQIYEPSWMYKCVPDE 470
+D++TP YEP + C DE
Sbjct: 180 YDDVTPPDYEPPFFRGCTEDE 200
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,024,868
Number of Sequences: 28952
Number of extensions: 183112
Number of successful extensions: 331
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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