Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1022.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n...    36   0.38 
UniRef50_UPI0000D8A037 Cluster: hypothetical protein eimer1508.t...    36   0.51 
UniRef50_A7RNJ2 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.51 
UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -...    36   0.51 
UniRef50_Q6ZSJ0 Cluster: CDNA FLJ45488 fis, clone BRTHA2003759; ...    36   0.67 
UniRef50_Q9U2F8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q4XUR4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q5DBE9 Cluster: SJCHGC01974 protein; n=2; Eukaryota|Rep...    33   2.7  
UniRef50_Q8I3T3 Cluster: Putative uncharacterized protein PFE087...    33   3.6  
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    33   4.7  
UniRef50_A3XKV9 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_Q57WI4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_Q4Y2G8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC1FED UniRef100 entry -
           Rattus norvegicus
          Length = 239

 Score = 36.3 bits (80), Expect = 0.38
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
 Frame = -3

Query: 224 VFFFYLFNFIYIKIF---CK*SFVYFYLCIKLFL-----ILRCVYKYLFIY 96
           V+ +Y++ +IYI I+   C    +Y Y+C+++ +     +  CVY Y+F+Y
Sbjct: 148 VYMYYIYIYIYIYIYMCVCVNVCMYVYVCVRVCMCDCGCVWMCVYMYVFVY 198


>UniRef50_UPI0000D8A037 Cluster: hypothetical protein
           eimer1508.tmp20; n=1; Eimeria tenella|Rep: hypothetical
           protein eimer1508.tmp20 - Eimeria tenella
          Length = 638

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -3

Query: 221 FFFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLF 102
           FFF+ F F +I  F    F++F++ + +F   + ++K++F
Sbjct: 62  FFFFFFKFTFIFFFFIFFFIFFFIFVFIFNFFKFIFKFIF 101


>UniRef50_A7RNJ2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 193

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 218 FFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLFIY 96
           F Y+ N + + ++C+ +     LCI L L + CVY   F+Y
Sbjct: 141 FMYIVNILMLHVYCEYTHASCILCILLMLHVYCVYSSCFMY 181


>UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 281

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 21/66 (31%), Positives = 39/66 (59%)
 Frame = -3

Query: 221 FFFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLFIY*CII*VAMSFLPV*KSLS 42
           FFFY+F FI+I IF    F++ ++ I +F+ +  ++ ++FI+   I + +    +   L 
Sbjct: 39  FFFYIFIFIFIFIFI---FIFIFIFIFIFIFI-FIFIFIFIF-IFIFIFIFIFYIFYILY 93

Query: 41  FSFYLL 24
           F FY+L
Sbjct: 94  FIFYIL 99



 Score = 33.9 bits (74), Expect = 2.0
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = -3

Query: 239 VFI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLFIY*CII*VAMSFLP 60
           +F    FFF+ F F YI IF    F++ ++ I +F+    ++ ++FI+  I      F+ 
Sbjct: 27  IFSFSYFFFFFFFFFYIFIFI---FIFIFIFIFIFIF---IFIFIFIFIFIFIFIFIFIF 80

Query: 59  V*KSLSFSFYLL 24
           +   + + FY+L
Sbjct: 81  IFIFIFYIFYIL 92


>UniRef50_Q6ZSJ0 Cluster: CDNA FLJ45488 fis, clone BRTHA2003759;
           n=2; Homo sapiens|Rep: CDNA FLJ45488 fis, clone
           BRTHA2003759 - Homo sapiens (Human)
          Length = 130

 Score = 35.5 bits (78), Expect = 0.67
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 218 FFYLFNFIYIKIFCK-*SFVYFYLCIKLFLILRCVYKYLFIY 96
           F Y+F FIYI I+     +VY YL I  F I   +Y Y+FIY
Sbjct: 12  FMYIFIFIYIFIYIYIYVYVYIYLYI-YFYIFTYIYLYIFIY 52



 Score = 35.1 bits (77), Expect = 0.88
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = -3

Query: 239 VFI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKLFL-----ILRCVYKYLFIY 96
           +FI    F Y++ ++Y+ I+    ++YFY+   ++L     I  C+Y YL+IY
Sbjct: 15  IFIFIYIFIYIYIYVYVYIYL---YIYFYIFTYIYLYIFIYIYICLYIYLYIY 64


>UniRef50_Q9U2F8 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 193

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -3

Query: 236 FI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLF 102
           F+  +F FY+F+ +++ IF + SF+Y    I L +I   VY + +
Sbjct: 149 FLYALFGFYIFSSLFLSIFVRFSFLYPIFLILLIVIFSIVYLWKY 193


>UniRef50_Q4XUR4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 71

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -3

Query: 209 LFNFIYI-KIFCK*SFVYFYLCIKLFLILRCVYKYLFIY 96
           +FNFIY+ KIF   + ++F++   +F I+   +K +FI+
Sbjct: 1   MFNFIYMYKIFIVLTIIFFFINFLIFFIVHVFFKNIFIF 39


>UniRef50_Q5DBE9 Cluster: SJCHGC01974 protein; n=2; Eukaryota|Rep:
           SJCHGC01974 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 138

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
 Frame = -3

Query: 224 VFFFYLFNFIYIKIFCK*S-FVYFYLCIKLFL-----ILRCVYKYLFIY 96
           + + Y++ +IYI I+   S ++Y Y+ I +++     I  C+Y Y++IY
Sbjct: 59  ICYIYIYMYIYIYIYIYISIYIYIYIYIYVYIYIYIYIYICIYMYIYIY 107



 Score = 32.7 bits (71), Expect = 4.7
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -3

Query: 212 YLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLFIY 96
           Y++ +IYI I+    ++Y Y+CI +  I   +Y Y++IY
Sbjct: 36  YIYIWIYIYIYLD-VYMYIYICIYICYIYIYMYIYIYIY 73


>UniRef50_Q8I3T3 Cluster: Putative uncharacterized protein PFE0875c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE0875c - Plasmodium falciparum (isolate 3D7)
          Length = 895

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 221 FFFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVY 114
           FFF+ F F YI +  K  ++Y Y+ I  F+ L  +Y
Sbjct: 20  FFFFFFFFFYILLIHKYIYIYMYIFIYAFIYLLNLY 55


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -3

Query: 239 VFI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKLFL---ILRCVYKYLFIY 96
           ++I    + Y+++FIYI ++   +++Y Y  I +++   +  C Y Y ++Y
Sbjct: 109 IYICTYLYIYIYSFIYIYMY---TYIYMYTYIYIYIYTYVYICFYTYTYLY 156


>UniRef50_A3XKV9 Cluster: Putative uncharacterized protein; n=1;
           Leeuwenhoekiella blandensis MED217|Rep: Putative
           uncharacterized protein - Leeuwenhoekiella blandensis
           MED217
          Length = 519

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -3

Query: 221 FFFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLFIY 96
           +FF+ F F Y + +   +FV   LC+ LF++L   + ++ I+
Sbjct: 139 YFFFSFLFRYTRDYTTYNFVMMSLCLTLFVLLDYQFLWMMIF 180


>UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1948

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 163  YIFIYVSSYF*SFDVYINIYLFINV*FEWRCPFFLYKNLYLSRFIY 26
            Y+FIY+  YF        IY+FI     W    + Y ++Y+S F++
Sbjct: 1440 YLFIYLFVYFLFIFYSFYIYIFIYYFKPWAYNKYTYVHIYISYFLF 1485


>UniRef50_Q57WI4 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 158

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = -3

Query: 239 VFI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKL-----FLILRCVYKY 108
           +F+ K+ + ++F   ++  F   SF++ ++C+ +     FL LR  Y Y
Sbjct: 83  IFVQKIIYLFIFLSFFLSFFLSFSFLFLFVCVCVCMCFFFLKLRATYHY 131


>UniRef50_Q4Y2G8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 44

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -3

Query: 218 FFYLFNFIYIKIFCK*SFVYFYLCIKLFLILRCVYKYLF 102
           FFYL   +Y+  F    F+YF   I LFL L C+ + +F
Sbjct: 7   FFYLIFLLYL-FFIIYMFIYFTFVIFLFLFLFCINENIF 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,663,952
Number of Sequences: 1657284
Number of extensions: 6254517
Number of successful extensions: 11939
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11715
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)