Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1020.Seq
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.1  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   9.1  

>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 15/56 (26%), Positives = 21/56 (37%)
 Frame = +2

Query: 149 YEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSHNDVRLYKIPKMTVAALHVTEK 316
           +E   PA + C       E  +  G      GD + D+ L       V A+HV  K
Sbjct: 434 FETGLPAGSYCDVISGNAENGSCSGKTITVGGDGYADISLGANEDDGVIAIHVNAK 489


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 227 QTLTSWLLHVARQTRHRDWW 168
           QTL  WL H        DW+
Sbjct: 658 QTLAMWLNHNPNYAEVTDWY 677


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = +2

Query: 164 PATNLCVSFGAPHEEANS*GFDCRGSGDSHNDVRLYKIPKMTVAALHVTEK 316
           PA + C       E  +  G      GD + D+ L       V A+HV  K
Sbjct: 438 PAGSYCDVISGNAENGSCSGKTITVGGDGYADISLGANEDDGVIAIHVNAK 488


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = +2

Query: 164 PATNLCVSFGAPHEEANS*GFDCRGSGDSHNDVRLYKIPKMTVAALHVTEK 316
           PA + C       E  +  G      GD + D+ L       V A+HV  K
Sbjct: 439 PAGSYCDVISGNAENGSCSGKTITVGGDGYADISLGANEDDGVIAIHVNAK 489


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -2

Query: 256 IVTVPTTTAIKPSRVGFF---MWRAKRDTEIGGRLIRLIKSRRR 134
           IVTV  T A+K S++  F   M R     +  G  I  ++ +RR
Sbjct: 89  IVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRR 132


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 313  FGNMKSSHRHLRYLVQS 263
            FG + S H HL  L++S
Sbjct: 1301 FGKLCSLHHHLSKLIKS 1317


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 304 CYRKSSCTHFGCWRRNSYF*SAGSSC 381
           CY       FG  +R S+F +  +SC
Sbjct: 150 CYSTYGIQVFGTMQRTSFFKTFLNSC 175


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 233 RGSGDSHNDVRLYKIPKMTVAALHV 307
           R  G+     + Y IPK T+  +H+
Sbjct: 67  RALGEDVRTQKGYLIPKDTITIIHI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,321
Number of Sequences: 336
Number of extensions: 2385
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)