Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1020.Seq
         (536 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   1.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   2.8  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   6.5  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   6.5  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   6.5  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 220 SRVGFFMWRAKRDTEIGGRLIRLIKSRRRTI 128
           +RVG  +W +K   E   R +  IKS+RR +
Sbjct: 266 ARVGLELWGSKSIGECTQRQLDNIKSKRRVV 296


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +2

Query: 230  CRGSGDSHNDVRLYKIPK--MTVAALHVTEKA-RARILAAGGE-ILTFDQLALRAPTGKK 397
            CR SG+SH +V   ++ K   T+     T  +  A ++A G +  ++  +     P  K+
Sbjct: 1186 CRKSGNSHQEVPADELMKKDATLGGNATTSTSNEAHVIANGHDGPVSAGKPPQAPPKAKR 1245

Query: 398  TVLVQGQRNAREAARHFG 451
            T L Q  R+A   + H+G
Sbjct: 1246 TTLGQYIRSA--CSNHYG 1261


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 266 LYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAA 439
           LY+ P++T  A+H       R+     E + +  +A    T  +   V     A EAA
Sbjct: 366 LYRKPELTPVAIHAGRIIARRLFGGSEERMDYADVATTVFTPLEYGCVGLSEEAAEAA 423


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 266 LYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAA 439
           LY+ P++T  A+H       R+     E + +  +A    T  +   V     A EAA
Sbjct: 342 LYRKPELTPVAIHAGRIIARRLFGGSEERMDYADVATTVFTPLEYGCVGLSEEAAEAA 399


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 266 LYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAA 439
           LY+ P++T  A+H       R+     E + +  +A    T  +   V     A EAA
Sbjct: 339 LYRKPELTPVAIHAGRIIARRLFGGSEERMDYADVATTVFTPLEYGCVGLSEEAAEAA 396


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,058
Number of Sequences: 2352
Number of extensions: 9922
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)