Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1020.Seq
(536 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030448-1|ABP87890.1| 188|Drosophila melanogaster IP16807p pro... 124 1e-28
AY113554-1|AAM29559.1| 188|Drosophila melanogaster RH01814p pro... 124 1e-28
AE014296-1212|AAF50596.1| 188|Drosophila melanogaster CG8615-PA... 124 1e-28
AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA... 30 2.3
AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA... 29 3.0
U82539-1|AAB71337.1| 214|Drosophila melanogaster arrowhead prot... 29 4.0
BT025230-1|ABF17921.1| 275|Drosophila melanogaster FI01007p pro... 29 5.3
AY071197-1|AAL48819.1| 275|Drosophila melanogaster RE24382p pro... 29 5.3
AE014296-705|AAF47800.2| 214|Drosophila melanogaster CG1072-PA,... 29 5.3
AE014296-704|AAN11572.1| 275|Drosophila melanogaster CG1072-PB,... 29 5.3
AY113578-1|AAM29583.1| 373|Drosophila melanogaster RH30783p pro... 28 7.0
AE014134-2987|AAF53717.1| 373|Drosophila melanogaster CG17321-P... 28 7.0
AY119529-1|AAM50183.1| 522|Drosophila melanogaster GH16664p pro... 28 9.3
AE014298-735|AAN09137.1| 519|Drosophila melanogaster CG10706-PD... 28 9.3
AE014298-734|AAF46030.2| 573|Drosophila melanogaster CG10706-PE... 28 9.3
AE014298-730|AAS65264.1| 924|Drosophila melanogaster CG10706-PF... 28 9.3
AE014298-729|AAN09136.2| 924|Drosophila melanogaster CG10706-PC... 28 9.3
>BT030448-1|ABP87890.1| 188|Drosophila melanogaster IP16807p
protein.
Length = 188
Score = 124 bits (298), Expect = 1e-28
Identities = 56/86 (65%), Positives = 68/86 (79%)
Frame = +2
Query: 242 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 421
G +D RL +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R
Sbjct: 84 GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRR 143
Query: 422 NAREAARHFGPAPGAPXSHXKPYVRT 499
AR A +HFG APG P SH +PYVR+
Sbjct: 144 TARTACKHFGKAPGVPHSHTRPYVRS 169
Score = 94.3 bits (224), Expect = 9e-20
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +3
Query: 3 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 182
DINHK+DRKVRRTE KSQD+ TN KFN+I+L+RLFMS+INRPP+S+
Sbjct: 4 DINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSL 63
Query: 183 SRLARHMKKPTREGLIAVVVGTVT 254
R+AR K + VVVGTVT
Sbjct: 64 QRIARFFKAANQPESTIVVVGTVT 87
>AY113554-1|AAM29559.1| 188|Drosophila melanogaster RH01814p
protein.
Length = 188
Score = 124 bits (298), Expect = 1e-28
Identities = 56/86 (65%), Positives = 68/86 (79%)
Frame = +2
Query: 242 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 421
G +D RL +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R
Sbjct: 84 GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRR 143
Query: 422 NAREAARHFGPAPGAPXSHXKPYVRT 499
AR A +HFG APG P SH +PYVR+
Sbjct: 144 TARTACKHFGKAPGVPHSHTRPYVRS 169
Score = 94.3 bits (224), Expect = 9e-20
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +3
Query: 3 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 182
DINHK+DRKVRRTE KSQD+ TN KFN+I+L+RLFMS+INRPP+S+
Sbjct: 4 DINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSL 63
Query: 183 SRLARHMKKPTREGLIAVVVGTVT 254
R+AR K + VVVGTVT
Sbjct: 64 QRIARFFKAANQPESTIVVVGTVT 87
>AE014296-1212|AAF50596.1| 188|Drosophila melanogaster CG8615-PA
protein.
Length = 188
Score = 124 bits (298), Expect = 1e-28
Identities = 56/86 (65%), Positives = 68/86 (79%)
Frame = +2
Query: 242 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 421
G +D RL +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R
Sbjct: 84 GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRR 143
Query: 422 NAREAARHFGPAPGAPXSHXKPYVRT 499
AR A +HFG APG P SH +PYVR+
Sbjct: 144 TARTACKHFGKAPGVPHSHTRPYVRS 169
Score = 94.3 bits (224), Expect = 9e-20
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +3
Query: 3 DINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISV 182
DINHK+DRKVRRTE KSQD+ TN KFN+I+L+RLFMS+INRPP+S+
Sbjct: 4 DINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSL 63
Query: 183 SRLARHMKKPTREGLIAVVVGTVT 254
R+AR K + VVVGTVT
Sbjct: 64 QRIARFFKAANQPESTIVVVGTVT 87
>AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA
protein.
Length = 841
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -1
Query: 305 HEEQPPSSSVSCTVSRHCDCPHYHGNQTLTSWLLHV-----ARQTRHRDWWPVDTAHKEP 141
H++QPP C +H PH+ + + S H +R++R + + AH+
Sbjct: 144 HQQQPPPPLHHCQQRKHSHSPHHSRHTSPHSHHHHSHHSRHSRRSRRQGSGSLPGAHQGS 203
Query: 140 A*NDLIEFGICTS 102
A + ++ ICTS
Sbjct: 204 ANHSVMRPSICTS 216
>AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA
protein.
Length = 819
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 305 HEEQPPSSSVSCTVSRHCDCP-HYHGNQTLT 216
HE P SS RHC P H H +TLT
Sbjct: 394 HEHYPSDSSCPVPPLRHCHAPGHGHATKTLT 424
>U82539-1|AAB71337.1| 214|Drosophila melanogaster arrowhead
protein.
Length = 214
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = -2
Query: 466 CSWSRAKVTRCLTSISLTLXQYCLLASRSTKSQLIKSKNFSSSSQNAC 323
CSW + C+ L Q C + R + SKNF + +C
Sbjct: 26 CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKSC 73
>BT025230-1|ABF17921.1| 275|Drosophila melanogaster FI01007p
protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 466 CSWSRAKVTRCLTSISLTLXQYCLLASRSTKSQLIKSKNFSSSSQNAC 323
CSW + C+ L Q C + R + SKNF + C
Sbjct: 26 CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73
>AY071197-1|AAL48819.1| 275|Drosophila melanogaster RE24382p
protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 466 CSWSRAKVTRCLTSISLTLXQYCLLASRSTKSQLIKSKNFSSSSQNAC 323
CSW + C+ L Q C + R + SKNF + C
Sbjct: 26 CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73
>AE014296-705|AAF47800.2| 214|Drosophila melanogaster CG1072-PA,
isoform A protein.
Length = 214
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 466 CSWSRAKVTRCLTSISLTLXQYCLLASRSTKSQLIKSKNFSSSSQNAC 323
CSW + C+ L Q C + R + SKNF + C
Sbjct: 26 CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73
>AE014296-704|AAN11572.1| 275|Drosophila melanogaster CG1072-PB,
isoform B protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 466 CSWSRAKVTRCLTSISLTLXQYCLLASRSTKSQLIKSKNFSSSSQNAC 323
CSW + C+ L Q C + R + SKNF + C
Sbjct: 26 CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73
>AY113578-1|AAM29583.1| 373|Drosophila melanogaster RH30783p
protein.
Length = 373
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 341 QQPKCVHELFR*HEEQPPSSSVSCTVSRHCDCPHYHGNQTLTSWLLHVARQTRH 180
Q P ELF E P S ++C+ H++GN T TS L + +Q+ +
Sbjct: 250 QVPDDASELFIEDREMTPMSPINCSTDLQATPYHHNGNAT-TSDLYNQQQQSSY 302
>AE014134-2987|AAF53717.1| 373|Drosophila melanogaster CG17321-PA
protein.
Length = 373
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 341 QQPKCVHELFR*HEEQPPSSSVSCTVSRHCDCPHYHGNQTLTSWLLHVARQTRH 180
Q P ELF E P S ++C+ H++GN T TS L + +Q+ +
Sbjct: 250 QVPDDASELFIEDREMTPMSPINCSTDLQATPYHHNGNAT-TSDLYNQQQQSSY 302
>AY119529-1|AAM50183.1| 522|Drosophila melanogaster GH16664p
protein.
Length = 522
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 428 EHFADLXPVLSSCQSEHEEPADQK*EFL 345
EH L +LS C ++H+E +Q+ FL
Sbjct: 465 EHMESLPDLLSRCLTQHQERIEQRRNFL 492
>AE014298-735|AAN09137.1| 519|Drosophila melanogaster CG10706-PD,
isoform D protein.
Length = 519
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 428 EHFADLXPVLSSCQSEHEEPADQK*EFL 345
EH L +LS C ++H+E +Q+ FL
Sbjct: 462 EHMESLPDLLSRCLTQHQERIEQRRNFL 489
>AE014298-734|AAF46030.2| 573|Drosophila melanogaster CG10706-PE,
isoform E protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 428 EHFADLXPVLSSCQSEHEEPADQK*EFL 345
EH L +LS C ++H+E +Q+ FL
Sbjct: 462 EHMESLPDLLSRCLTQHQERIEQRRNFL 489
>AE014298-730|AAS65264.1| 924|Drosophila melanogaster CG10706-PF,
isoform F protein.
Length = 924
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 428 EHFADLXPVLSSCQSEHEEPADQK*EFL 345
EH L +LS C ++H+E +Q+ FL
Sbjct: 867 EHMESLPDLLSRCLTQHQERIEQRRNFL 894
>AE014298-729|AAN09136.2| 924|Drosophila melanogaster CG10706-PC,
isoform C protein.
Length = 924
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 428 EHFADLXPVLSSCQSEHEEPADQK*EFL 345
EH L +LS C ++H+E +Q+ FL
Sbjct: 867 EHMESLPDLLSRCLTQHQERIEQRRNFL 894
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,804,187
Number of Sequences: 53049
Number of extensions: 504530
Number of successful extensions: 1524
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -