Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1019.Seq
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 33 0.20
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z75526-2|CAA99768.2| 341|Caenorhabditis elegans Hypothetical pr... 31 0.80
U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z82096-6|CAD98732.2| 124|Caenorhabditis elegans Hypothetical pr... 30 1.4
U60979-2|AAC47278.1| 119|Caenorhabditis elegans CES-2 region pi... 30 1.4
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 30 1.4
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 30 1.4
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 30 1.4
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 30 1.4
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49132-12|CAA88990.3| 931|Caenorhabditis elegans Hypothetical p... 29 3.2
Z48716-7|CAA88602.3| 931|Caenorhabditis elegans Hypothetical pr... 29 3.2
U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical pr... 28 4.3
AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical... 28 4.3
U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific ... 28 5.7
U39678-6|AAK39206.1| 208|Caenorhabditis elegans Hypothetical pr... 28 5.7
U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha ... 28 5.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.7
Z92777-11|CAB07168.2| 338|Caenorhabditis elegans Hypothetical p... 27 7.5
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 27 7.5
Z92832-7|CAB07376.1| 180|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 27 9.9
U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical pr... 27 9.9
L23646-10|AAA28037.2| 242|Caenorhabditis elegans Hypothetical p... 27 9.9
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = -2
Query: 497 KSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEP 318
K+ +K K+ K + K+ + A KNE K++ N + I K + T EP
Sbjct: 95 KTGEKEKKEKKKEATQKKQKSVRKTAKPKNEEKDAEAPVENDDKKISEEGINKTDKTEEP 154
Query: 317 KCENKLIQKFSDSENNSITSHRMDTLK 237
+ E K + SDS+ + DTL+
Sbjct: 155 ELEKKK-SELSDSKKERLRED--DTLR 178
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 31.1 bits (67), Expect = 0.61
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = -2
Query: 476 KKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLI 297
KK KE K +S A +NKN+ +TK + S +K+ + KC++
Sbjct: 2210 KKRAEEEKEAAEKKEESKNAEDEKNKNNAENKKDTKEGEKGKSKDKEKDGEKEKCKDASK 2269
Query: 296 QKFSDSENNSITSHRMD 246
+ SE N + D
Sbjct: 2270 KDDVTSEKNELEKRASD 2286
>Z75526-2|CAA99768.2| 341|Caenorhabditis elegans Hypothetical
protein C06H2.2 protein.
Length = 341
Score = 30.7 bits (66), Expect = 0.80
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -2
Query: 554 KIESKPREIQM**MERLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINK 384
+IES RE++ E+ L++ N +VL++ N+E K + + L N+ K
Sbjct: 257 EIESSGREVRS-ATEKALLRKNDRVLQRQTKENEEKEKKRNEEETKLNNQENEGEKK 312
>U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical
protein F23F12.9a protein.
Length = 176
Score = 30.7 bits (66), Expect = 0.80
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 491 NKKVLKKAKISNKENTYKNT-------KSDAALKNENKNSINKSLNTKANLQNCSIEKDN 333
N + KK++ S K KN + +AAL+ E K + + + +++ SIE++
Sbjct: 75 NNEAAKKSRASRKHREQKNQTENELLKRKNAALEEELKQAKCELAQMQITIRDMSIEREA 134
Query: 332 FTSEPKCENKLIQKFSDSE 276
+ E + + KF+DS+
Sbjct: 135 YRRENEMLKMVNNKFADSK 153
>Z82096-6|CAD98732.2| 124|Caenorhabditis elegans Hypothetical
protein ZK909.6 protein.
Length = 124
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -2
Query: 452 ENTYKNTKSDAAL-KNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLIQKFSDSE 276
EN+YK TK D + +E +++I KS K N + E +S+ L F+D+
Sbjct: 44 ENSYK-TKIDRQVGDSEEEDNIRKSCVQKQNAEKSEEETSPPSSDADLPTSLADSFNDTT 102
Query: 275 --NNSITSHRMD 246
N +I RM+
Sbjct: 103 PYNGTIVDDRME 114
>U60979-2|AAC47278.1| 119|Caenorhabditis elegans CES-2 region
pioneer protein.
Length = 119
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -2
Query: 452 ENTYKNTKSDAAL-KNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLIQKFSDSE 276
EN+YK TK D + +E +++I KS K N + E +S+ L F+D+
Sbjct: 39 ENSYK-TKIDRQVGDSEEEDNIRKSCVQKQNAEKSEEETSPPSSDADLPTSLADSFNDTT 97
Query: 275 --NNSITSHRMD 246
N +I RM+
Sbjct: 98 PYNGTIVDDRME 109
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -2
Query: 497 KSNKKVLKKAKISNKENTYKNT---KSDAALKNENKNSINKSLNTKANLQNCSIEKDNFT 327
KS K+ K AK+ K + K T K++ + E + K +AN +NC ++N
Sbjct: 229 KSGGKIGKVAKLGEKSSGEKRTRMTKAEMSRLTEKEKLERKKEQNRANAKNCVKNRNNSK 288
Query: 326 SEPK 315
E K
Sbjct: 289 EELK 292
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -2
Query: 497 KSNKKVLKKAKISNKENTYKNT---KSDAALKNENKNSINKSLNTKANLQNCSIEKDNFT 327
KS K+ K AK+ K + K T K++ + E + K +AN +NC ++N
Sbjct: 246 KSGGKIGKVAKLGEKSSGEKRTRMTKAEMSRLTEKEKLERKKEQNRANAKNCVKNRNNSK 305
Query: 326 SEPK 315
E K
Sbjct: 306 EELK 309
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -2
Query: 497 KSNKKVLKKAKISNKENTYKNT---KSDAALKNENKNSINKSLNTKANLQNCSIEKDNFT 327
KS K+ K AK+ K + K T K++ + E + K +AN +NC ++N
Sbjct: 246 KSGGKIGKVAKLGEKSSGEKRTRMTKAEMSRLTEKEKLERKKEQNRANAKNCVKNRNNSK 305
Query: 326 SEPK 315
E K
Sbjct: 306 EELK 309
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -2
Query: 497 KSNKKVLKKAKISNKENTYKNT---KSDAALKNENKNSINKSLNTKANLQNCSIEKDNFT 327
KS K+ K AK+ K + K T K++ + E + K +AN +NC ++N
Sbjct: 229 KSGGKIGKVAKLGEKSSGEKRTRMTKAEMSRLTEKEKLERKKEQNRANAKNCVKNRNNSK 288
Query: 326 SEPK 315
E K
Sbjct: 289 EELK 292
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 503 LIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSIN-KSLNTKANLQNCSIEKD 336
LI++ KK+ K + N +N K T + K S+N K+ + +AN+++ +IEK+
Sbjct: 257 LIRTTKKL--KDDLQNVKNELKMTNEMKKTLEQEKMSLNSKTEHLQANMESLNIEKE 311
>Z49132-12|CAA88990.3| 931|Caenorhabditis elegans Hypothetical
protein F59B10.1 protein.
Length = 931
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 476 KKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEK--DNFTSEPKCENK 303
K A+IS + N Y K A+ N N NKSL + CS+ N TS+PK K
Sbjct: 585 KVAEISRRLNEYAVRKKLASSMASNLNGDNKSL----SYSRCSLTSTATNATSQPKRSRK 640
>Z48716-7|CAA88602.3| 931|Caenorhabditis elegans Hypothetical
protein F59B10.1 protein.
Length = 931
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 476 KKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEK--DNFTSEPKCENK 303
K A+IS + N Y K A+ N N NKSL + CS+ N TS+PK K
Sbjct: 585 KVAEISRRLNEYAVRKKLASSMASNLNGDNKSL----SYSRCSLTSTATNATSQPKRSRK 640
>U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical
protein F16H11.3 protein.
Length = 434
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +1
Query: 268 ELFSESLNFCI-NLFSHFGSEV--KLSFSIEQF*RFALVFNDLFIEFLF 405
E+++ +F + NLF+ GS V K+ + ++ +FA++ LFI F F
Sbjct: 299 EIYTLLTSFLVFNLFAAIGSIVASKIHWPTPRYLKFAIILRALFIPFFF 347
>AC006696-10|AAF39990.1| 228|Caenorhabditis elegans Hypothetical
protein W08E12.1 protein.
Length = 228
Score = 28.3 bits (60), Expect = 4.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 21 HHYWFYYHRSAYFSDCFQIFQCP 89
+H+ Y H S + ++C+Q CP
Sbjct: 27 YHHHHYPHSSVHHTECYQTLSCP 49
>U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific
transcript protein20 protein.
Length = 231
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 494 SNKKVLKKAKISNKENTYKNTKSDAAL-KNENKNSINKSLNTK 369
S+ K +KK+ ENT +++K + KN+N S++ L+++
Sbjct: 174 SSIKSIKKSPTEKSENTDRSSKGSLKIRKNKNSKSVSMPLDSR 216
>U39678-6|AAK39206.1| 208|Caenorhabditis elegans Hypothetical
protein C39D10.2 protein.
Length = 208
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 447 ILFITYFSLFKHFFITLY*QSFHLSH 524
IL +T+F +FK+FF++ + F++ H
Sbjct: 64 ILSLTFFRIFKYFFVSYFSIFFNVFH 89
>U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha
chain (clathrinassociated complex) protein 2 protein.
Length = 925
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 473 KAKISNKENTYKN-TKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEP 318
+ +I+NK++ K TKS+A L ++ I L T+ NL + N TS+P
Sbjct: 678 EVEIANKDDYLKFVTKSNAILWEDDYIQIGCKLETRNNLGRLGMFYGNKTSQP 730
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = -2
Query: 476 KKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLI 297
K K+ E+ K + + K ++ K K L++ + K TSE + + K
Sbjct: 10063 KTKKVIEDESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSKKP-TSEKQKDEKTP 10121
Query: 296 QKFSDSENNSITSHRMDTLKMK 231
Q+ + SEN ++ + L++K
Sbjct: 10122 QEKAKSENETVMTTEPQQLEVK 10143
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = -2
Query: 476 KKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLI 297
K K+ E+ K + + K ++ K K L++ + K TSE + + K
Sbjct: 10083 KTKKVIEDESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSKKP-TSEKQKDEKTP 10141
Query: 296 QKFSDSENNSITSHRMDTLKMK 231
Q+ + SEN ++ + L++K
Sbjct: 10142 QEKAKSENETVMTTEPQQLEVK 10163
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = -2
Query: 476 KKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLI 297
K K+ E+ K + + K ++ K K L++ + K TSE + + K
Sbjct: 10083 KTKKVIEDESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSKKP-TSEKQKDEKTP 10141
Query: 296 QKFSDSENNSITSHRMDTLKMK 231
Q+ + SEN ++ + L++K
Sbjct: 10142 QEKAKSENETVMTTEPQQLEVK 10163
>Z92777-11|CAB07168.2| 338|Caenorhabditis elegans Hypothetical
protein C17H1.4 protein.
Length = 338
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -2
Query: 497 KSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANL 360
+SN++ + K + KE +SD ALKN+ K++ NK + T+ +
Sbjct: 92 ESNRREDELVKSNQKEQIEAMQRSDEALKNQ-KDADNKEILTREKI 136
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 386 KSLNTKANLQNCSIEKDNFTSEPKCENKLIQKFSDSENNSITSHRMDT 243
K +NT N I + EP + + +QK S S N I+ +++T
Sbjct: 160 KFVNTVVRDVNNYIMSNRCECEPSIDIEFVQKLSSSSRNPISDEKINT 207
>Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical
protein R09A8.2 protein.
Length = 891
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 494 SNKKVLKKAKISNKENTYKNTKSDAALKNENKN-SINKSLNTKANLQNCSIEKDNFTSEP 318
S + + K+ + + ++ K +++ + N+N S SL+ ++N+ +CS TSE
Sbjct: 743 SKESLSKRMEQERMKQFWQKEKHESSRDDANENASFVHSLDVESNVDSCSSTGTQETSEK 802
Query: 317 KCENKLI 297
K + ++
Sbjct: 803 KRQENVL 809
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -2
Query: 554 KIESKPREIQM**MERLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSL 378
K E K E++ + +++K K V KAK N T K TK+D NE + + K +
Sbjct: 582 KTEEKTEEVE----KPVVVKKTKPVEPKAKKINVALTIKETKTDNIDLNEEEVTAAKKV 636
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -2
Query: 554 KIESKPREIQM**MERLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSL 378
K E K E++ + +++K K V KAK N T K TK+D NE + + K +
Sbjct: 598 KTEEKTEEVE----KPVVVKKTKPVEPKAKKINVALTIKETKTDNIDLNEEEVTAAKKV 652
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 467 KISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKL 300
K+ NK+ + K D K++NK N++ +T S F EP ENK+
Sbjct: 93 KLENKKPKVEVKKEDE--KSKNKKMKNQNKHTALVQNETSTRSTYFVEEPDNENKV 146
>Z92832-7|CAB07376.1| 180|Caenorhabditis elegans Hypothetical
protein F31D4.8 protein.
Length = 180
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -2
Query: 458 NKENTYKNTKSDAALKNE-NKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLIQKF 288
N+E+ + S A LK +NS N S + NLQN D E C + + F
Sbjct: 30 NRESDVQQKSSIAGLKGSLRRNSSNLSQDFSTNLQNEICHADATNIEINCSSSARRAF 87
>Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical
protein T28F4.3 protein.
Length = 490
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 491 NKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDN 333
++ VLKKAKISN ++N K K SI++ + K ++ DN
Sbjct: 50 SQNVLKKAKISNMTREFRNNKE---YKPNVTTSISEKMMDKNRYRHIFCGDDN 99
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/76 (25%), Positives = 41/76 (53%)
Frame = -2
Query: 551 IESKPREIQM**MERLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNT 372
+++K E++M ++L + N + +K K+ +E + + K A LK + N + NT
Sbjct: 567 LKAKRIELKMK-QKKLKAELNDEKMKNQKL--EEAAFNDRKEKAELKKKVSNLEQSAQNT 623
Query: 371 KANLQNCSIEKDNFTS 324
+ LQN + E + +++
Sbjct: 624 QRTLQNQTRELNLYST 639
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/87 (26%), Positives = 32/87 (36%)
Frame = -2
Query: 473 KAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKDNFTSEPKCENKLIQ 294
K K S E + + LK EN N +N + Q+ DN E++ IQ
Sbjct: 227 KRKYSTLEEYSEEINWELKLKVENLG--NLEMNFETVYQDLQTANDNMEKYKSSESERIQ 284
Query: 293 KFSDSENNSITSHRMDTLKMKD*QIKK 213
K + + I K QIKK
Sbjct: 285 KLLEEQKAEILKEEEIKRKELSEQIKK 311
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 515 MERLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKD 336
M+RL+ KK+ K+ K ++K+ K+T+ +L+ +NK K K + +D
Sbjct: 1 MDRLI----KKIDKRKKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKE----ARD 52
Query: 335 NFTSEPKCEN 306
+ TSE E+
Sbjct: 53 SSTSEESEES 62
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 515 MERLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCSIEKD 336
M+RL+ KK+ K+ K ++K+ K+T+ +L+ +NK K K + +D
Sbjct: 1 MDRLI----KKIDKRKKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKE----ARD 52
Query: 335 NFTSEPKCEN 306
+ TSE E+
Sbjct: 53 SSTSEESEES 62
>U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical
protein C16D9.4 protein.
Length = 409
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = -2
Query: 509 RLLIKSNKKVLKKAKISNKENTYKNTKSDAALKNENKNSINKSLNTKANLQNCS----IE 342
R L+KSN+K + +K+ N + K +S A + ++L + +C +E
Sbjct: 78 RNLVKSNEKPQRSSKVINTSSESKPAQSQIAASQRSSPGYPQNLTSIGKQFDCGHLPILE 137
Query: 341 KDNFTSEP 318
K N P
Sbjct: 138 KLNLVDNP 145
>L23646-10|AAA28037.2| 242|Caenorhabditis elegans Hypothetical
protein F44E2.8 protein.
Length = 242
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 497 KSNKKVLKKAKI-SNKENTYKNTKSDAALKNENKNSINKSLNTKANL 360
K+ K +LK+AKI + K + +K+ S A LK+ + N++ K L
Sbjct: 116 KATKNILKEAKIPAKKISAWKDKDSIAVLKHVIYHKFNQNDELKVKL 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,185,768
Number of Sequences: 27780
Number of extensions: 172198
Number of successful extensions: 654
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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