Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1018.Seq
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 141 1e-32
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 121 1e-26
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 99 6e-20
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 98 1e-19
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 95 1e-18
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 88 1e-16
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 87 3e-16
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 85 1e-15
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 81 1e-14
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 81 2e-14
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 78 1e-13
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 77 2e-13
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 76 6e-13
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 71 1e-11
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 70 4e-11
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 63 4e-09
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 62 1e-08
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 59 6e-08
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 59 8e-08
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 58 1e-07
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 55 1e-06
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 54 3e-06
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 53 4e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 49 8e-05
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 45 0.001
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 44 0.002
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 43 0.005
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 42 0.009
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 42 0.012
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 42 0.012
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 37 0.35
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 37 0.35
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.47
UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n... 36 0.82
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 35 1.4
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 34 1.9
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 33 3.3
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 33 4.4
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 32 7.6
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 32 7.6
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 141 bits (341), Expect = 1e-32
Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 121 bits (292), Expect = 1e-26
Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HY+GQQ+GKV+QVYRK ++Y + +EK
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREK 89
Score = 68.9 bits (161), Expect = 7e-11
Identities = 34/61 (55%), Positives = 47/61 (77%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGK
Sbjct: 77 KYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGK 128
Query: 77 Y 75
Y
Sbjct: 129 Y 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 99.1 bits (236), Expect = 6e-20
Identities = 47/90 (52%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = -2
Query: 487 RMKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVR 308
+MKFNKQ++S+ RK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + R
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICR 88
Query: 307 GHYKGQQVGKVMQVYRKNL-LYTLRGFKEK 221
GH G++ GKV+++ RK +Y R +EK
Sbjct: 89 GHNHGRE-GKVVKINRKRFKIYVERVTREK 117
Score = 67.3 bits (157), Expect = 2e-10
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 117
+F +Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 105 RFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MK N +VTSS RK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 304 HYKG 293
YKG
Sbjct: 61 SYKG 64
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 94.7 bits (225), Expect = 1e-18
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = -2
Query: 475 NKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 296
N + SS RK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 295 GQQVGKVMQVYR 260
G++ GKV VYR
Sbjct: 65 GRE-GKVTSVYR 75
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 90
K+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 77 KWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 87.8 bits (208), Expect = 1e-16
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = -2
Query: 481 KFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 302
K + V+S RK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 301 YKGQQVGKVMQVYR 260
KGQ+ GK+ VYR
Sbjct: 63 KKGQE-GKISSVYR 75
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 105
KF V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 77 KFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MK + +V+S RK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 304 HYKGQQVGKVMQVYRK 257
+KG + GKV VYRK
Sbjct: 61 THKGTK-GKVSSVYRK 75
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 90
++ + IE++ R KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 76 RWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 84.6 bits (200), Expect = 1e-15
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MK++ VTSS RK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V RG
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRG 79
Query: 304 HYKGQQVGKVMQVYRK 257
+K ++ GKV+QVYRK
Sbjct: 80 SFKNRE-GKVVQVYRK 94
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 81.4 bits (192), Expect = 1e-14
Identities = 38/61 (62%), Positives = 49/61 (80%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
++V+++ERI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK
Sbjct: 86 RWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGK 143
Query: 77 Y 75
+
Sbjct: 144 F 144
Score = 52.0 bits (119), Expect = 9e-06
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -2
Query: 415 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKN-LLYTL 239
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+ +++
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 238 RGFKEK 221
R +EK
Sbjct: 93 RITREK 98
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIE +Q+EKANG T +VGIHPSK VI +LK++KDRK I +++AK A GK+KGK
Sbjct: 59 KYVIYIEWVQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGK 116
Query: 77 Y 75
Y
Sbjct: 117 Y 117
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = -2
Query: 373 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKNLLYTLRGFKEKR 218
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRK + + ++++
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEK 71
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 78.2 bits (184), Expect = 1e-13
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN +V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 304 HYKGQQVGKVMQVYRKNLLYTL 239
H K GKV V R + +
Sbjct: 61 HQK--VAGKVTAVRRSKYVINI 80
Score = 52.4 bits (120), Expect = 7e-06
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 108
K+V+ I+++ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 75 KYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 77.4 bits (182), Expect = 2e-13
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = -2
Query: 463 TSSXRKNRKRHFSAPS-H-IRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQ 290
TSS + F P H + +LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG+
Sbjct: 24 TSSWEQPPAAFFLTPLLHGVIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGR 83
Query: 289 QVGKVMQVY-RKNLLYTLRGFKEKRPMVQQH 200
+ GKV+QVY +K +++ R EK P+ H
Sbjct: 84 E-GKVVQVYCQKRVIHVKRISHEKIPIGFPH 113
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 75.8 bits (178), Expect = 6e-13
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MK N VT+S RK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 304 HYKGQQVGKVMQVYRKNLLYTLRGFKEK 221
+KG GKV++V R++ + G +K
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQK 86
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = -2
Query: 463 TSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 284
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 283 GKVMQVYRKNLLYTLRG 233
G+V++V K L + G
Sbjct: 65 GEVVEVDLKRLRIYVEG 81
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 248 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 123
+Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 77 IYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 69.7 bits (163), Expect = 4e-11
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
M F K + RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 304 HYKGQQVGKVMQVYRKNLLYTLRGFKEKR 218
+KG + G+V++V K + G KR
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKR 86
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = -2
Query: 451 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 272
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 271 QV 266
+
Sbjct: 82 DI 83
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Frame = -1
Query: 248 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 84
+ ++ REK NG T +V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 80 IVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
Score = 52.4 bits (120), Expect = 7e-06
Identities = 27/73 (36%), Positives = 44/73 (60%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
+K N ++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 304 HYKGQQVGKVMQV 266
+ G++ GKV+ V
Sbjct: 62 KFAGRE-GKVIAV 73
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/83 (33%), Positives = 53/83 (63%)
Frame = -2
Query: 466 VTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 287
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 286 VGKVMQVYRKNLLYTLRGFKEKR 218
GKV++V RK + G +K+
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKK 83
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 58.8 bits (136), Expect = 8e-08
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -2
Query: 463 TSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 284
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 283 GKVMQV-YRKNLLY 245
GKV +V Y++ +Y
Sbjct: 66 GKVTRVDYKRVRIY 79
Score = 40.7 bits (91), Expect = 0.022
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -1
Query: 248 VYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 93
+Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 78 IYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = -2
Query: 472 KQVTSSXRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 296
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 295 GQQVGKVMQV 266
G + GKV V
Sbjct: 63 GHE-GKVTSV 71
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -2
Query: 472 KQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 293
KQ TSS RK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 292 QQVGKVMQV-YRKNLLY 245
++ G + ++ YR +Y
Sbjct: 66 KE-GVISKINYRDYKVY 81
Score = 35.9 bits (79), Expect = 0.62
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -1
Query: 254 FVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 108
+ VYIE K +G A V I+PSK I K + RK L+R+ + R
Sbjct: 78 YKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MK+ VT S RKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 304 HYKGQQVGKVMQV 266
+KG + GKV+Q+
Sbjct: 61 DFKG-KTGKVIQI 72
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = -2
Query: 472 KQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 293
+ V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 292 QQVGKVMQV 266
+ GKV V
Sbjct: 66 TE-GKVQSV 73
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 48.8 bits (111), Expect = 8e-05
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -2
Query: 448 KNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 272
K R R + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK GKV
Sbjct: 5 KMRNRQIYQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVS 63
Query: 271 QVYRKNLLYTLRGFKEKR 218
V ++ + G K+++
Sbjct: 64 HVDTESGSVAIEGIKKEK 81
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 529 GIDKL*XEFXGR-CDRMKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSP 386
G+ +L E GR M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 81 GLARLGSEANGREMFSMNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -2
Query: 391 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKNLLYTLRGFKEKR 218
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ ++ + G K+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKK 64
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -2
Query: 385 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKNLLYTLRG 233
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K + ++ G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEG 59
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 41.9 bits (94), Expect = 0.009
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = -2
Query: 385 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKNLLYTLRG 233
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V + L + G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEG 58
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 41.5 bits (93), Expect = 0.012
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = -2
Query: 451 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 272
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 271 QVYRKNLLYTLRGFKEKR 218
+V + G K+++
Sbjct: 64 EVSTAKSSVAIEGVKKEK 81
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = -2
Query: 448 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 269
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 268 V 266
V
Sbjct: 66 V 66
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.7 bits (81), Expect = 0.35
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -2
Query: 466 VTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 299
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 36.7 bits (81), Expect = 0.35
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -2
Query: 355 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKNLLYTLRGFKEKRPMVQQHMSA 191
+K IRKDD+V V+ G KG ++GKV++V RK R EK + ++HM A
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKK----DRVLVEKVNVAKRHMRA 50
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.47
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 32 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 145
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
Rattus norvegicus
Length = 294
Score = 35.5 bits (78), Expect = 0.82
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 74 CIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECRHMLLHHWPFLFESSQC--- 244
C+ C+C C +C +C + T +HT +G HM +H F S C
Sbjct: 43 CVRACVCMYVRTCMYVCVCVCVCTDRHTHT-HTHTKRGRRMHMCIHEHSFQLLLSFCWLH 101
Query: 245 IQQIFTIHLHHFANLLTFV 301
+ +HL ++ LL FV
Sbjct: 102 RDERCFVHLQNYIYLLCFV 120
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 34.7 bits (76), Expect = 1.4
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 263 IHLHHFANLLTFVVSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPYM*RSTEMPLP 442
+ LHH L V ++L+ +V A+ G + ++ +G GH+ + R E+ LP
Sbjct: 124 VDLHHLP-LAALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRREVRLP 182
Query: 443 VFPS*GSHLLVELH 484
P H V LH
Sbjct: 183 ALPPGARHAWVALH 196
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 34.3 bits (75), Expect = 1.9
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = -2
Query: 421 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKNLLYT 242
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ + +
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 241 LRG 233
+ G
Sbjct: 64 VEG 66
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 33.5 bits (73), Expect = 3.3
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 388 PLSKELRQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMQVYRKN 254
P +EL +KFNV IRK E+ V +G+ Y+ Q G ++ + KN
Sbjct: 28 PTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAKN 73
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 33.1 bits (72), Expect = 4.4
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = -2
Query: 346 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKNLLYTLRGFKEKRPMVQ 206
M I++ D+VQV+ G YKG ++ +V++V RK+ L+ K V+
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNINIKNKHVK 46
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.3 bits (70), Expect = 7.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 71 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 196
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 340 IRKDDEVQVVRGHYKGQQVGKVMQVYRK 257
I+K D V VVRG KG+Q GKV++VY +
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVYER 32
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,721,848
Number of Sequences: 1657284
Number of extensions: 9452592
Number of successful extensions: 25584
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 24816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25575
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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