Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1018.Seq
(548 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 24 0.76
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.3
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 7.1
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 9.4
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 9.4
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 24.2 bits (50), Expect = 0.76
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 173 HTLKGECRHMLLHHWPFLFESS 238
HT + +C H LL H P L + S
Sbjct: 352 HTPEPDCIHELLGHMPLLADPS 373
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 121 EQRADWLHLAKTRVNTPRKLPQPW 50
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 219 GQWCNSICRHSP 184
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 121 EQRADWLHLAKTRVNTPRKLPQPW 50
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 219 GQWCNSICRHSP 184
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 121 EQRADWLHLAKTRVNTPRKLPQPW 50
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 219 GQWCNSICRHSP 184
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 121 EQRADWLHLAKTRVNTPRKLPQPW 50
++ A +H R+ P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 219 GQWCNSICRHSP 184
G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 2.3
Identities = 17/78 (21%), Positives = 33/78 (42%)
Frame = -2
Query: 493 CDRMKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQV 314
CD+ F+ S + H+ HI R + S + ++ KS+P+RK E++
Sbjct: 553 CDQA-FSSLKELSNHMVKNSHYK--EHIMRSITESGGRRRQTREKRKKSLPVRKLLELER 609
Query: 313 VRGHYKGQQVGKVMQVYR 260
+ +K ++ R
Sbjct: 610 AQHEFKNGDSSSLLDKMR 627
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 147 FIHLQLDNHTL*RVNADICCCTIGLFSLN 233
F +L+N++L +N + +GL+ LN
Sbjct: 316 FCKKKLENYSLQLINHRVVFTAMGLYVLN 344
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 20.6 bits (41), Expect = 9.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 324 KFRLYVDTTKV 292
KFR+Y+ TK+
Sbjct: 658 KFRIYIQVTKI 668
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 254 IFTIHLHHFANLLTFVVS 307
IF IH F LLT+V S
Sbjct: 2 IFKIHFLVFGALLTYVSS 19
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,228
Number of Sequences: 336
Number of extensions: 2528
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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