Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1018.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 141 2e-33
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 141 2e-33
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 141 2e-33
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 141 2e-33
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 141 2e-33
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 140 2e-33
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 140 2e-33
BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein. 29 8.1
AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, mem... 29 8.1
AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, mem... 29 8.1
AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein. 29 8.1
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 141 bits (341), Expect = 2e-33
Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 141 bits (341), Expect = 2e-33
Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 88.2 bits (209), Expect = 2e-17
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+K K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKSK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 141 bits (341), Expect = 2e-33
Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 141 bits (341), Expect = 2e-33
Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 141 bits (341), Expect = 2e-33
Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 140 bits (340), Expect = 2e-33
Identities = 67/89 (75%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 140 bits (340), Expect = 2e-33
Identities = 67/89 (75%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 305
MKFN VTS KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 304 HYKGQQVGKVMQVYRKN-LLYTLRGFKEK 221
HYKGQQ+GKV+QVYRK ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 90.6 bits (215), Expect = 3e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -1
Query: 257 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 78
K+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 77 Y 75
Y
Sbjct: 135 Y 135
>BC151239-1|AAI51240.1| 1299|Homo sapiens TBC1D4 protein protein.
Length = 1299
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -2
Query: 541 LEVDGIDKL*XEFXGRCDRMK-FNKQVTSSXRKN--RKRHFSAPSHIR 407
LE G D+ EF RC + ++V +K+ R+RH SAPSH++
Sbjct: 301 LEDSGFDEQ-QEFRSRCSSVTGVQRRVHEGSQKSQPRRRHASAPSHVQ 347
>AL162571-2|CAI39591.1| 1298|Homo sapiens TBC1 domain family, member
4 protein.
Length = 1298
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -2
Query: 541 LEVDGIDKL*XEFXGRCDRMK-FNKQVTSSXRKN--RKRHFSAPSHIR 407
LE G D+ EF RC + ++V +K+ R+RH SAPSH++
Sbjct: 301 LEDSGFDEQ-QEFRSRCSSVTGVQRRVHEGSQKSQPRRRHASAPSHVQ 347
>AL139230-1|CAH70991.1| 1298|Homo sapiens TBC1 domain family, member
4 protein.
Length = 1298
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -2
Query: 541 LEVDGIDKL*XEFXGRCDRMK-FNKQVTSSXRKN--RKRHFSAPSHIR 407
LE G D+ EF RC + ++V +K+ R+RH SAPSH++
Sbjct: 301 LEDSGFDEQ-QEFRSRCSSVTGVQRRVHEGSQKSQPRRRHASAPSHVQ 347
>AB011175-1|BAA25529.2| 1348|Homo sapiens KIAA0603 protein protein.
Length = 1348
Score = 29.5 bits (63), Expect = 8.1
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -2
Query: 541 LEVDGIDKL*XEFXGRCDRMK-FNKQVTSSXRKN--RKRHFSAPSHIR 407
LE G D+ EF RC + ++V +K+ R+RH SAPSH++
Sbjct: 350 LEDSGFDEQ-QEFRSRCSSVTGVQRRVHEGSQKSQPRRRHASAPSHVQ 396
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,479,976
Number of Sequences: 237096
Number of extensions: 1388535
Number of successful extensions: 4520
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4520
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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