Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1013.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   5.0  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   6.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   8.7  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    22   8.7  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 154 RTSYGDTQPRRSGCAFSNSSDQ 219
           R  Y +T+    GC F  SSD+
Sbjct: 329 RARYNETRDEHMGCNFLISSDE 350


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 383 PTSTVQVSSHALSALAPGALITPTPFLPAESTS 285
           PT+T  V+    + +APG   T T   P ++T+
Sbjct: 45  PTTTTTVAPTTTTTVAPGQ-TTTTTVAPGQTTT 76


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 398 RGXPEPTSTVQVSSHALSALAPGALITPTPFLPAESTSM 282
           R     +STV  S+   S+   G + TP    PA+S  +
Sbjct: 420 RSSDATSSTVTSSNKRSSSAMSGPIATPDTSRPAKSVKL 458


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 348 QRIGARSVDHSDALFTGGVD 289
           QRI  RSV   D  F  G+D
Sbjct: 57  QRIPVRSVPMPDLSFANGID 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,845
Number of Sequences: 2352
Number of extensions: 5638
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)