Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1013.Seq
(449 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062768-1|AAY56641.1| 332|Drosophila melanogaster unknown prot... 60 2e-09
AY058282-1|AAL13511.1| 332|Drosophila melanogaster GH03305p pro... 60 2e-09
AE014134-2042|AAF53080.1| 332|Drosophila melanogaster CG6287-PA... 60 2e-09
AY069170-1|AAL39315.1| 386|Drosophila melanogaster GH20987p pro... 31 0.71
AJ224690-1|CAA12074.1| 386|Drosophila melanogaster C-terminal b... 31 0.71
AE014297-1618|AAN14340.1| 386|Drosophila melanogaster CG7583-PD... 31 0.71
AE014297-1617|AAN14339.1| 386|Drosophila melanogaster CG7583-PC... 31 0.71
AE014297-1616|AAF54892.1| 386|Drosophila melanogaster CG7583-PB... 31 0.71
AE014297-1615|AAF54891.1| 386|Drosophila melanogaster CG7583-PA... 31 0.71
AE014297-1614|AAX52947.1| 476|Drosophila melanogaster CG7583-PE... 31 0.71
AB011840-1|BAA25287.1| 383|Drosophila melanogaster CtBP protein. 31 0.71
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro... 29 2.2
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ... 29 2.2
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB... 29 2.2
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA... 29 2.2
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 29 3.8
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 29 3.8
AE014297-152|AAF52092.2| 2228|Drosophila melanogaster CG17735-PA... 29 3.8
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 29 3.8
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 29 3.8
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 29 3.8
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 29 3.8
>DQ062768-1|AAY56641.1| 332|Drosophila melanogaster unknown
protein.
Length = 332
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +2
Query: 41 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 220
M ++I+ VL+ D V C ELL +GI T K K+ EEL E+ N DA +VRS T++T
Sbjct: 1 MPLNIRKVLVCDAVDKSCVELLEQHGIKVTYKLKLPVEELCQEVKNFDAAIVRSDTKITA 60
Query: 221 E 223
E
Sbjct: 61 E 61
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELTCTVDVGSGXPRGPSFTALKAGR 432
DNIDV +A + V V+N PG N++SACELTC + P P+ ++K GR
Sbjct: 81 DNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPAGQSMKEGR 132
>AY058282-1|AAL13511.1| 332|Drosophila melanogaster GH03305p
protein.
Length = 332
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +2
Query: 41 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 220
M ++I+ VL+ D V C ELL +GI T K K+ EEL E+ N DA +VRS T++T
Sbjct: 1 MPLNIRKVLVCDAVDKSCVELLEQHGIKVTYKLKLPVEELCQEVKNFDAAIVRSDTKITA 60
Query: 221 E 223
E
Sbjct: 61 E 61
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELTCTVDVGSGXPRGPSFTALKAGR 432
DNIDV +A + V V+N PG N++SACELTC + P P+ ++K GR
Sbjct: 81 DNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPAGQSMKEGR 132
>AE014134-2042|AAF53080.1| 332|Drosophila melanogaster CG6287-PA
protein.
Length = 332
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +2
Query: 41 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 220
M ++I+ VL+ D V C ELL +GI T K K+ EEL E+ N DA +VRS T++T
Sbjct: 1 MPLNIRKVLVCDAVDKSCVELLEQHGIKVTYKLKLPVEELCQEVKNFDAAIVRSDTKITA 60
Query: 221 E 223
E
Sbjct: 61 E 61
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELTCTVDVGSGXPRGPSFTALKAGR 432
DNIDV +A + V V+N PG N++SACELTC + P P+ ++K GR
Sbjct: 81 DNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPAGQSMKEGR 132
>AY069170-1|AAL39315.1| 386|Drosophila melanogaster GH20987p
protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AJ224690-1|CAA12074.1| 386|Drosophila melanogaster C-terminal
binding protein protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AE014297-1618|AAN14340.1| 386|Drosophila melanogaster CG7583-PD,
isoform D protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AE014297-1617|AAN14339.1| 386|Drosophila melanogaster CG7583-PC,
isoform C protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AE014297-1616|AAF54892.1| 386|Drosophila melanogaster CG7583-PB,
isoform B protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AE014297-1615|AAF54891.1| 386|Drosophila melanogaster CG7583-PA,
isoform A protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AE014297-1614|AAX52947.1| 476|Drosophila melanogaster CG7583-PE,
isoform E protein.
Length = 476
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>AB011840-1|BAA25287.1| 383|Drosophila melanogaster CtBP protein.
Length = 383
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DNIDVDSAGKKGVGVINAPGANALSACELT 366
DNIDV +AG+ G+ V N PG + T
Sbjct: 103 DNIDVKAAGELGIAVCNVPGYGVEEVADTT 132
>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p protein.
Length = 1823
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 437 PNLPAFSAVKLGPRGXPEPTSTVQVSSHALSALAPG-ALITPTPFLPAESTSM 282
P A +A GP G P VQ + AP ALIT PF PA +M
Sbjct: 1330 PYAAAAAAAAGGPGGPPTTPQVVQQAPPPPPQSAPHHALITAAPFYPANGGNM 1382
>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
protein encore protein.
Length = 1548
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 437 PNLPAFSAVKLGPRGXPEPTSTVQVSSHALSALAPG-ALITPTPFLPAESTSM 282
P A +A GP G P VQ + AP ALIT PF PA +M
Sbjct: 1181 PYAAAAAAAAGGPGGPPTTPQVVQQAPPPPPQSAPHHALITAAPFYPANGGNM 1233
>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
isoform B protein.
Length = 1818
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 437 PNLPAFSAVKLGPRGXPEPTSTVQVSSHALSALAPG-ALITPTPFLPAESTSM 282
P A +A GP G P VQ + AP ALIT PF PA +M
Sbjct: 1325 PYAAAAAAAAGGPGGPPTTPQVVQQAPPPPPQSAPHHALITAAPFYPANGGNM 1377
>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
isoform A protein.
Length = 1823
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 437 PNLPAFSAVKLGPRGXPEPTSTVQVSSHALSALAPG-ALITPTPFLPAESTSM 282
P A +A GP G P VQ + AP ALIT PF PA +M
Sbjct: 1330 PYAAAAAAAAGGPGGPPTTPQVVQQAPPPPPQSAPHHALITAAPFYPANGGNM 1382
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 449 TEPGPNLPAFSAVKLGPRGXPEPTSTVQVSSHA---LSALAPGALITPTPFLP 300
T+P P +K GP G P Q+ S A +S PGA TP + P
Sbjct: 680 TQPPPGYLIDGQLKYGPSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPP 732
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 449 TEPGPNLPAFSAVKLGPRGXPEPTSTVQVSSHA---LSALAPGALITPTPFLP 300
T+P P +K GP G P Q+ S A +S PGA TP + P
Sbjct: 680 TQPPPGYLIDGQLKYGPSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPP 732
>AE014297-152|AAF52092.2| 2228|Drosophila melanogaster CG17735-PA
protein.
Length = 2228
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 428 PAFSAVKLGPRGXPEPTSTVQVSSHALSALAPGALITPTPFLPAESTS 285
P S+ P + +V+ SHA++AL A TP+ L A S+S
Sbjct: 793 PGLSSASTTPSSSKHQSYSVKSFSHAMNALTASAKGTPSGALDATSSS 840
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 449 TEPGPNLPAFSAVKLGPRGXPEPTSTVQVSSHA---LSALAPGALITPTPFLP 300
T+P P +K GP G P Q+ S A +S PGA TP + P
Sbjct: 680 TQPPPGYLIDGQLKYGPSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPP 732
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 449 TEPGPNLPAFSAVKLGPRGXPEPTSTVQVSSHA---LSALAPGALITPTPFLP 300
T+P P +K GP G P Q+ S A +S PGA TP + P
Sbjct: 680 TQPPPGYLIDGQLKYGPSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPP 732
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 449 TEPGPNLPAFSAVKLGPRGXPEPTSTVQVSSHA---LSALAPGALITPTPFLP 300
T+P P +K GP G P Q+ S A +S PGA TP + P
Sbjct: 680 TQPPPGYLIDGQLKYGPSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPP 732
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 449 TEPGPNLPAFSAVKLGPRGXPEPTSTVQVSSHA---LSALAPGALITPTPFLP 300
T+P P +K GP G P Q+ S A +S PGA TP + P
Sbjct: 680 TQPPPGYLIDGQLKYGPSGQGVPPQPPQLHSDAAGGVSGAPPGAPTTPQKYPP 732
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,843,754
Number of Sequences: 53049
Number of extensions: 278720
Number of successful extensions: 958
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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