Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1011.Seq
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   1.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   8.1  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 84  TDVKVAPNFVFGETNKSED 140
           ++  ++P+ VFG+  KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 181 SNAGTFPAGNFFKKSSDL 128
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 181 SNAGTFPAGNFFKKSSDL 128
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 181 SNAGTFPAGNFFKKSSDL 128
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 117 QIRNSVLLSHQSRNIVRRSTLYKRG 43
           QIR +  +SH+  N      L++RG
Sbjct: 218 QIRGTFFVSHKYTNYSAVQDLHRRG 242


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 117 QIRNSVLLSHQSRNIVRRSTLYKRG 43
           QIR +  +SH+  N      L++RG
Sbjct: 225 QIRGTFFVSHKYTNYSAVQDLHRRG 249


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 177 MQALFRQETSSRSLRTCWS 121
           +  +F  ETS     TCW+
Sbjct: 102 LYGIFGHETSCTRYWTCWN 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,513
Number of Sequences: 336
Number of extensions: 1771
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)