Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1011.Seq
(409 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 134 4e-32
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 134 4e-32
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 132 2e-31
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 132 2e-31
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 132 2e-31
AY118917-1|AAM50777.1| 226|Drosophila melanogaster LD22317p pro... 36 0.016
AE013599-799|AAF58982.1| 226|Drosophila melanogaster CG11784-PA... 36 0.016
AY070667-1|AAL48138.1| 243|Drosophila melanogaster RH04924p pro... 31 0.58
AE014296-1469|AAF50405.1| 243|Drosophila melanogaster CG6781-PA... 31 0.58
AY122149-1|AAM52661.1| 229|Drosophila melanogaster LD04004p pro... 30 1.0
AE013599-2682|AAF57695.1| 223|Drosophila melanogaster CG17531-P... 30 1.0
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 29 3.1
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 27 9.5
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 27 9.5
AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 27 9.5
AY051572-1|AAK92996.1| 407|Drosophila melanogaster GH21941p pro... 27 9.5
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 27 9.5
AE014297-2603|AAF55612.2| 917|Drosophila melanogaster CG31149-P... 27 9.5
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 27 9.5
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 27 9.5
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 27 9.5
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 27 9.5
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 27 9.5
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 134 bits (324), Expect = 4e-32
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +3
Query: 3 TMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFE 182
TM G LYTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE
Sbjct: 20 TMVKGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFE 79
Query: 183 SADGKVLLTESNAIAYYVANESLR 254
+A+G+ L+ESNAIAY +ANE LR
Sbjct: 80 TAEGQ-YLSESNAIAYLLANEQLR 102
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 272 QARVWQXASWSDSELLXASCXRVXPTL 352
QA+V Q S++D+E++ ASC V P L
Sbjct: 110 QAQVQQWISFADNEIVPASCAWVFPLL 136
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 134 bits (324), Expect = 4e-32
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +3
Query: 3 TMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFE 182
TM G LYTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE
Sbjct: 29 TMVKGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFE 88
Query: 183 SADGKVLLTESNAIAYYVANESLR 254
+A+G+ L+ESNAIAY +ANE LR
Sbjct: 89 TAEGQ-YLSESNAIAYLLANEQLR 111
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 272 QARVWQXASWSDSELLXASCXRVXPTL 352
QA+V Q S++D+E++ ASC V P L
Sbjct: 119 QAQVQQWISFADNEIVPASCAWVFPLL 145
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 132 bits (319), Expect = 2e-31
Identities = 64/83 (77%), Positives = 70/83 (84%)
Frame = +3
Query: 6 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 185
M G LYTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+
Sbjct: 1 MVKGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFET 60
Query: 186 ADGKVLLTESNAIAYYVANESLR 254
A+G+ L+ESNAIAY +ANE LR
Sbjct: 61 AEGQ-YLSESNAIAYLLANEQLR 82
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 132 bits (319), Expect = 2e-31
Identities = 64/83 (77%), Positives = 70/83 (84%)
Frame = +3
Query: 6 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 185
M G LYTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+
Sbjct: 1 MVKGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFET 60
Query: 186 ADGKVLLTESNAIAYYVANESLR 254
A+G+ L+ESNAIAY +ANE LR
Sbjct: 61 AEGQ-YLSESNAIAYLLANEQLR 82
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 272 QARVWQXASWSDSELLXASCXRVXPTL 352
QA+V Q S++D+E++ ASC V P L
Sbjct: 90 QAQVQQWISFADNEIVPASCAWVFPLL 116
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 132 bits (319), Expect = 2e-31
Identities = 64/83 (77%), Positives = 70/83 (84%)
Frame = +3
Query: 6 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 185
M G LYTYPENFRAYKALIAAQYSG VKVA NF FGETNKS +FLKKFP GKVPAFE+
Sbjct: 1 MVKGTLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFET 60
Query: 186 ADGKVLLTESNAIAYYVANESLR 254
A+G+ L+ESNAIAY +ANE LR
Sbjct: 61 AEGQ-YLSESNAIAYLLANEQLR 82
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 272 QARVWQXASWSDSELLXASCXRVXPTL 352
QA+V Q S++D+E++ ASC V P L
Sbjct: 90 QAQVQQWISFADNEIVPASCAWVFPLL 116
>AY118917-1|AAM50777.1| 226|Drosophila melanogaster LD22317p
protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.016
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +3
Query: 48 AYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIA 227
A ++ A+ G D+++ P + + SE+F+K P ++P F +DG+V + +
Sbjct: 15 ARACILVAKLIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDGEVYVDSHAIVC 74
Query: 228 YYVANESLRVEIWLPKPVSGXGHXGLTANY 317
+ VA + +++ P+ + H +Y
Sbjct: 75 FLVAKYAGNDQLY-PRDLKRRAHIDHRMHY 103
>AE013599-799|AAF58982.1| 226|Drosophila melanogaster CG11784-PA
protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.016
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +3
Query: 48 AYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIA 227
A ++ A+ G D+++ P + + SE+F+K P ++P F +DG+V + +
Sbjct: 15 ARACILVAKLIGLDLELKPVDFAKKEHLSEEFVKLNPQHQIPVFVDSDGEVYVDSHAIVC 74
Query: 228 YYVANESLRVEIWLPKPVSGXGHXGLTANY 317
+ VA + +++ P+ + H +Y
Sbjct: 75 FLVAKYAGNDQLY-PRDLKRRAHIDHRMHY 103
>AY070667-1|AAL48138.1| 243|Drosophila melanogaster RH04924p
protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 123 TNKSEDFLKKFPAGKVPAFE--SADGKVLLTESNAIAYYV 236
T+K E L+K P GKVPA E G +LTES I Y+
Sbjct: 55 TDKPEWLLEKNPQGKVPALEIVREPGPPVLTESLLICEYL 94
>AE014296-1469|AAF50405.1| 243|Drosophila melanogaster CG6781-PA
protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 123 TNKSEDFLKKFPAGKVPAFE--SADGKVLLTESNAIAYYV 236
T+K E L+K P GKVPA E G +LTES I Y+
Sbjct: 55 TDKPEWLLEKNPQGKVPALEIVREPGPPVLTESLLICEYL 94
>AY122149-1|AAM52661.1| 229|Drosophila melanogaster LD04004p
protein.
Length = 229
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 126 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRVEIWLPK 275
N SE+FLKK P VP E DG + +S+AI Y+ ++ + + PK
Sbjct: 47 NFSEEFLKKNPQHTVPTLED-DGH-YIWDSHAIIAYLVSKYGKTDSLYPK 94
>AE013599-2682|AAF57695.1| 223|Drosophila melanogaster CG17531-PA
protein.
Length = 223
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 126 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRVEIWLPK 275
N SE+FLKK P VP E DG + +S+AI Y+ ++ + + PK
Sbjct: 41 NFSEEFLKKNPQHTVPTLED-DGH-YIWDSHAIIAYLVSKYGKTDSLYPK 88
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 272 QARVWQXASWSDSELLXASCXRVXPTL 352
QA+V Q S++D+E++ ASC V P L
Sbjct: 19 QAQVQQWISFADNEIVPASCAWVFPLL 45
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
protein protein.
Length = 1091
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 120 ETNKSEDFLKKFP---AGKVPAFESA---DGKVLLTESNAIAYYVANESLRVEIWLPKPV 281
E+ +SE++ KK + K A A + KV L E+N +A N+ +V I +P P
Sbjct: 458 ESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIPMPPPP 517
Query: 282 SGXG 293
G G
Sbjct: 518 PGGG 521
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
protein.
Length = 1091
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 120 ETNKSEDFLKKFP---AGKVPAFESA---DGKVLLTESNAIAYYVANESLRVEIWLPKPV 281
E+ +SE++ KK + K A A + KV L E+N +A N+ +V I +P P
Sbjct: 458 ESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIPMPPPP 517
Query: 282 SGXG 293
G G
Sbjct: 518 PGGG 521
>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p
protein.
Length = 1022
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 195 FHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLS 91
FH + +++ + S RTCWS + N+ LS
Sbjct: 176 FHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLS 210
>AY051572-1|AAK92996.1| 407|Drosophila melanogaster GH21941p
protein.
Length = 407
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 205 RSTFPSALSNAGTFPAGNFFKKSSDLLVSPNTKFG 101
R F SA S+AG GNF + S L+ SPN G
Sbjct: 52 RYFFESAKSDAGDC-GGNFSNQDSGLITSPNWPAG 85
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 195 FHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLS 91
FH + +++ + S RTCWS + N+ LS
Sbjct: 1293 FHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLS 1327
>AE014297-2603|AAF55612.2| 917|Drosophila melanogaster CG31149-PA
protein.
Length = 917
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 205 RSTFPSALSNAGTFPAGNFFKKSSDLLVSPNTKFG 101
R F SA S+AG GNF + S L+ SPN G
Sbjct: 562 RYFFESAKSDAGDC-GGNFSNQDSGLITSPNWPAG 595
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 195 FHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLS 91
FH + +++ + S RTCWS + N+ LS
Sbjct: 1293 FHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLS 1327
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 195 FHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLS 91
FH + +++ + S RTCWS + N+ LS
Sbjct: 1293 FHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLS 1327
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 195 FHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLS 91
FH + +++ + S RTCWS + N+ LS
Sbjct: 1293 FHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLS 1327
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 120 ETNKSEDFLKKFP---AGKVPAFESA---DGKVLLTESNAIAYYVANESLRVEIWLPKPV 281
E+ +SE++ KK + K A A + KV L E+N +A N+ +V I +P P
Sbjct: 458 ESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIPMPPPP 517
Query: 282 SGXG 293
G G
Sbjct: 518 PGGG 521
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +3
Query: 120 ETNKSEDFLKKFP---AGKVPAFESA---DGKVLLTESNAIAYYVANESLRVEIWLPKPV 281
E+ +SE++ KK + K A A + KV L E+N +A N+ +V I +P P
Sbjct: 458 ESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIPMPPPP 517
Query: 282 SGXG 293
G G
Sbjct: 518 PGGG 521
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,860,473
Number of Sequences: 53049
Number of extensions: 338811
Number of successful extensions: 837
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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