Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1004.Seq
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    30   0.016
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   5.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   5.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 29.9 bits (64), Expect = 0.016
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
           +LPP +  PSP    P++   VS     PP   P
Sbjct: 70  ALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSP 103


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 167  LVWWKGVSSYSGRCGCKVQSVVTKLFRNEL 78
            +VW   +  +  RCGC    ++ K   NEL
Sbjct: 2659 MVWALDLDDFKNRCGCGKHPLL-KTLNNEL 2687


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 165 QAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGN 299
           Q  PSP+  P  +PT  ++   P   S+ +  + S + T ++ G+
Sbjct: 72  QGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGS 116


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 54  HDHRFRMEQLVSEQFRHHGL 113
           H HRFR++  +S   RH  L
Sbjct: 101 HPHRFRLKFNISSIPRHEKL 120


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 298 TGRYDQSRG 324
           TGRYD++RG
Sbjct: 232 TGRYDETRG 240


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 167 LVWWKGVSSYSGRCGCKV 114
           ++W   V+ Y+G   CKV
Sbjct: 82  IIWKTTVAWYAGNVACKV 99


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 401 GQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPM-AQMLPSERFHV 538
           G   P G GP       + + P+  T    +I P  A M+P E  H+
Sbjct: 412 GTYMPFGVGPRNCIAKFDIV-PNGKTVIPIKISPSTANMVPQEGIHL 457


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 13  RLFLQLHYLHDRITMTIALEWNNSFRNNF 99
           ++FL  H L     + +ALE NN+    F
Sbjct: 160 KVFLVEHILVQTNKLVLALECNNTTAEGF 188


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 13  RLFLQLHYLHDRITMTIALEWNNSFRNNF 99
           ++FL  H L     + +ALE NN+    F
Sbjct: 160 KVFLVEHILVQTNKLVLALECNNTTAEGF 188


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/42 (26%), Positives = 15/42 (35%)
 Frame = +3

Query: 180 PADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWP 305
           P + P  +  +   R     VSQP +  P   F       WP
Sbjct: 237 PGNGPLDLSVSSRKRSNDDSVSQPPNRKPRTDFKPQVLPQWP 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,404
Number of Sequences: 336
Number of extensions: 2394
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)