Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1004.Seq
(554 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 33 0.20
04_04_0765 - 27910189-27912393,27912521-27912598 32 0.27
01_01_0070 - 542603-542686,542803-543441 31 0.47
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 31 0.62
12_02_1174 - 26696869-26698191 31 0.82
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 31 0.82
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.82
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 30 1.1
09_06_0081 + 20745627-20748144,20748211-20748308 30 1.4
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 30 1.4
06_03_0905 + 25843547-25844314 30 1.4
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 1.9
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 29 1.9
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 29 1.9
12_01_0135 + 1042889-1044255,1045368-1045809 29 2.5
11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118 29 3.3
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 29 3.3
02_04_0381 - 22497519-22497769,22498157-22498247 29 3.3
05_01_0511 + 4256220-4256828,4256920-4257175,4257247-4257309,425... 24 4.1
11_01_0133 + 1121392-1122731,1123417-1123858 28 4.4
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 28 4.4
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 28 4.4
04_01_0519 + 6831912-6831978,6832333-6832488,6832748-6833098,683... 28 4.4
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 28 4.4
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 28 4.4
01_03_0113 - 12647599-12648052,12648078-12648319 28 4.4
12_02_1017 + 25339515-25339548,25339689-25339837,25339932-253399... 28 5.8
10_08_1037 - 22477358-22478752 28 5.8
09_03_0085 - 12209697-12210457,12212823-12213255 28 5.8
07_03_0890 - 22332768-22333382 28 5.8
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 28 5.8
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898... 28 5.8
05_01_0453 - 3592555-3592897,3592997-3593067,3593372-3593465,359... 28 5.8
04_03_0218 + 12780061-12780150,12780864-12781394 28 5.8
01_05_0647 + 23910318-23910694,23911732-23911867,23912067-239122... 28 5.8
01_01_0082 + 625198-625719 28 5.8
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 27 7.6
09_04_0180 + 15367737-15367755,15368874-15369739 27 7.6
07_01_1153 - 10842259-10842390,10843348-10845315 27 7.6
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 27 7.6
07_01_0015 + 108338-109186 27 7.6
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 27 7.6
06_03_0220 + 18276641-18276915,18278445-18278676 27 7.6
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 27 7.6
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 27 7.6
01_06_1613 + 38643833-38643974,38644054-38644190,38644828-386452... 27 7.6
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 27 7.6
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696... 27 7.6
01_01_0046 - 331758-332627 27 7.6
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 32.7 bits (71), Expect = 0.20
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
PP + P+PA P +P + S P V P+ PS + SA G + P+Q
Sbjct: 122 PPPEPTPTPAPAPAAVPPSASV---PSTVVPPVAAPPSALLPMSAAGASAMSPMQ 173
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
A PSP RV PP +G GT PR P + R P+ Q P+
Sbjct: 553 AVPSPPRVSPVPPSASGAGT-SLPRTTCTPPTGGEWLRPESPLPQQAPT 600
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPS 269
PP P P PPV P VS PPP + P L PS
Sbjct: 91 PPPPVTPPPVTPPPVTPPPVS----PPPATPPPALPPS 124
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 377 ASPSPSRVGQTP-PVG-AGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSE 526
A+PSP ++ P P A G V P E KPHS P+R P P E
Sbjct: 36 AAPSPKKLKTQPQPAAEADGGAVAKPEE--KPHSPVKPKRSSSPTKSNSPGE 85
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVI-PTTVSARDRPPPVSQP 251
PP P P RPP + P V + +PPP QP
Sbjct: 155 PPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQP 187
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVI-PTTVSARDRPPPVSQP 251
SL P P P RPP + P V + +PPP P
Sbjct: 184 SLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPP 218
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Frame = +3
Query: 159 PHQAFPSPADR------PPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRP 314
PH+ P P PPV T V + RPPP ++P + T +WP P
Sbjct: 171 PHKEMPLPQPTTMEMPPPPVTCTPVVEKPRPPPCARPFYPVDMATPTMVEIPSWPAAP 228
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
N LPP SP+DR P+ +A PPP P
Sbjct: 518 NQLPPEVQHESPSDRKLPSPSPTAAAPPPPPPPPP 552
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSA-RD--RPPPVSQPLHLNPSWIFTRSACGNWPVRPV 317
+S P FPS AD+PP I +S+ RD PP ++ H S + + G + + P
Sbjct: 311 SSTPSLGNFPSTADKPPRIHADMSSIRDVSVPPDTTETEHPTRSMLSSSKEVGTY-IEPT 369
Query: 318 QGRPQA 335
+P A
Sbjct: 370 PQKPPA 375
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQGRPQA 335
PP PSPA P T PP ++ P+ P + S P P+ R A
Sbjct: 519 PPVSTLPSPAPSVHTPPVTAPPATAPPMIAPPVATPPDSASSPSTVPRMPSAPLALRALA 578
Query: 336 --IRAL 347
+RAL
Sbjct: 579 PHLRAL 584
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 383 PSPSRVGQTPPVGAGPGTVD---TPREAIKPHSSTSP 484
PSP+ TPPV A P T P A P S++SP
Sbjct: 525 PSPAPSVHTPPVTAPPATAPPMIAPPVATPPDSASSP 561
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 383 PSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P+P+ G +PP A G TP +A P S +P P A P
Sbjct: 73 PTPASPGDSPPSIAPAGNPPTPAQAGAPPPSIAPGTGSPPPATTTP 118
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Frame = +3
Query: 156 PPHQAFP-SPADRPPVIPTTVSARDRPPPV----SQPLHLNPSWIFTRSACGNWPVRPVQ 320
P H P +P RPP PT S RPPP+ P+ P TR +P PV
Sbjct: 50 PGHPKGPKNPTPRPPKGPTYPSPVTRPPPLVAPPKVPVTHPPKGPVTRPPPVTYPTPPVT 109
Query: 321 GRPQAI 338
P +
Sbjct: 110 TPPVVV 115
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRP 314
PP Q PSP PP P PPP P SW S+ P+ P
Sbjct: 74 PPPQTPPSPPPPPPPPPP-------PPPPLSPTPTTTSWTTNSSSISASPILP 119
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPT-TVSARDRPP-PVSQPLHLNPS 269
P HQ P P PP PT S +PP P QP+ +P+
Sbjct: 492 PRHQPSPPPLRSPPRQPTPPPSPSQQPPLPAPQPVQASPT 531
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PP PS PP P SA+ PPP ++P L+P
Sbjct: 91 PPPAQKPSKVSPPPP-PPQKSAKVSPPPAAKPPKLSP 126
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 156 PPHQAF-PSPADRPPVIPTTVSARDRPPPVSQP 251
P H A P A PP PT+V+A PPP +QP
Sbjct: 141 PSHPALLPPDATAPPPPPTSVAALP-PPPPAQP 172
>11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118
Length = 325
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 186 DRPPVIPTTVSARDRPPPVSQPLHLNPSWI 275
+ PP +PT + R RPP + +P P W+
Sbjct: 35 EAPPALPTRPTVRGRPPSLQRP-GSPPPWV 63
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPT-TVSARDRPP-PVSQPLHLNPS 269
P H P P PP PT S +PP PV QP+ +P+
Sbjct: 492 PRHPPSPPPLRSPPRQPTPPPSPSQQPPLPVPQPVQASPT 531
>02_04_0381 - 22497519-22497769,22498157-22498247
Length = 113
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 162 HQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
H PSP D P+ D PPP S P
Sbjct: 39 HDPSPSPPDHEDPSPSPPDHEDEPPPPSSP 68
>05_01_0511 +
4256220-4256828,4256920-4257175,4257247-4257309,
4257397-4257491
Length = 340
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 6 AHPSVPPAPLFARPNHHDHR 65
A P PP P+ RP H HR
Sbjct: 262 AAPQRPPRPIGPRPAAHVHR 281
Score = 22.6 bits (46), Expect(2) = 4.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPT 209
PPH+ F +P PP T
Sbjct: 285 PPHRGFRAPFTTPPSTST 302
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 156 PPHQAF-PSPADRPPVIPTTVSARDRPPP 239
P H A P A PP PT+V+A PPP
Sbjct: 140 PSHPALLPPDATAPPPPPTSVAALPPPPP 168
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
PP A P+P P P A+ PPP + P
Sbjct: 21 PPPAAAPAPPPSQPPPPPLPFAQQAPPPAANP 52
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTR 284
+SLP + A S PP + +A PPP PLH + S + +R
Sbjct: 80 SSLPKNLALISLLPSPPNPSRSRTAAAAPPPPHVPLHADHSRLLSR 125
>04_01_0519 +
6831912-6831978,6832333-6832488,6832748-6833098,
6833481-6833662,6833756-6834004,6834182-6834406,
6837492-6837791,6838642-6839215,6839959-6840059
Length = 734
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -1
Query: 161 WWKGVSSYS----GRCGCKVQSVVTKLFRNELFH 72
WW+ ++S S G C +QS T LF N+L++
Sbjct: 596 WWRDITSLSDIFRGIAKCTIQSGATALFWNDLWN 629
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Frame = +3
Query: 171 FPSPADRPPVIPTTVSAR------DRPPPVSQPLHLN 263
FPSP +PP PT + D PP VS LN
Sbjct: 559 FPSPVPKPPKDPTPIKEESPNKKTDTPPAVSSQAELN 595
>02_05_1276 +
35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 156 PPHQAFPSPA----DRPPVIPTTVSARDRPPPVSQPLH 257
PP QA PSPA R P P + S PP + P H
Sbjct: 3 PPPQAGPSPAVRVLSRTPPPPASSSPSPPPPAATPPSH 40
>01_03_0113 - 12647599-12648052,12648078-12648319
Length = 231
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVS 245
+S PP A P A PP T +R PPP++
Sbjct: 42 SSPPPPPASPPSAASPPATSTASRSRTCPPPLA 74
>12_02_1017 +
25339515-25339548,25339689-25339837,25339932-25339990,
25340665-25340742,25341155-25341347,25341424-25341454,
25341534-25341592,25341674-25341747,25342228-25342314,
25342353-25342379,25342522-25342583,25342676-25342704,
25343037-25343129
Length = 324
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +2
Query: 398 VGQTPPVGAGPGTVDTP------REAIKPHSSTSPERRIEPMAQMLPSERFHVYXGQ 550
VG P GAG TV + + + H + S E +A MLP + FH+Y Q
Sbjct: 110 VGIAGPPGAGKSTVASEVVQRVNKRWSQKHENGSSLISTEEIATMLPMDGFHLYRSQ 166
>10_08_1037 - 22477358-22478752
Length = 464
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PH+ P P + P P+ + RPPP+S P+ P
Sbjct: 251 PHRPLP-PQHQQPKPPSMRLQKIRPPPISTPVARPP 285
>09_03_0085 - 12209697-12210457,12212823-12213255
Length = 397
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 205 GITGGRSAGDGNAWCGGR 152
GI GG G WCGGR
Sbjct: 343 GIMGGGGGGAARRWCGGR 360
>07_03_0890 - 22332768-22333382
Length = 204
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTV-SARDRPPPVSQPLHLNPS 269
PP +A P P PP V A D PPP P P+
Sbjct: 78 PPAEATPPPPPPPPPPERAVPEAADTPPPPPPPTAPTPT 116
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPP 236
PP +A P AD PP P + PP
Sbjct: 92 PPERAVPEAADTPPPPPPPTAPTPTPP 118
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 383 PSPSRVGQTPPVGAGPGTVDTPREA-IKPHSSTSP 484
P+ S VGQ P V GP V T + I P +T P
Sbjct: 850 PTTSGVGQVPTVSQGPRFVSTQTVSYISPSMNTGP 884
>06_01_1096 -
8988463-8989167,8989335-8989361,8989560-8989648,
8989830-8990039,8990877-8991047,8991595-8991777,
8991886-8991969,8992067-8992178
Length = 526
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPT 209
S+PP+Q P+ RPP+IPT
Sbjct: 304 SIPPYQKPLKPSLRPPLIPT 323
>05_01_0453 -
3592555-3592897,3592997-3593067,3593372-3593465,
3593547-3593614,3593694-3593760,3593924-3594054,
3594145-3594252,3594671-3594757,3594991-3595056,
3595564-3595630,3596116-3596192,3596358-3596417,
3597363-3597480,3597833-3597906,3598216-3598312,
3599328-3599380,3599535-3599630,3599768-3599965,
3600556-3600722,3600813-3600882,3601428-3601448,
3602851-3602982
Length = 754
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 380 SPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSE 526
SPSP + TP VD+P+ +KP +P+ + + L SE
Sbjct: 687 SPSPIQAPATPKAAH----VDSPKSPMKPEQHLNPDNELANLGAELGSE 731
>04_03_0218 + 12780061-12780150,12780864-12781394
Length = 206
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 147 NSLPPHQAFP-SPADRPPVIPTTVSARDRP 233
N L QA PA+RPP++PT+ +R P
Sbjct: 102 NQLSKQQASAIKPAERPPLLPTSPGSRPLP 131
>01_05_0647 +
23910318-23910694,23911732-23911867,23912067-23912277,
23912357-23912724,23913793-23914081,23914173-23914372,
23914452-23914646
Length = 591
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 153 LPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
LPP + P P + P PT V+ PPP + L P
Sbjct: 50 LPPSRHHPPPPEEPEPEPTPVN-HHYPPPTTPAYSLPP 86
>01_01_0082 + 625198-625719
Length = 173
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPS 269
S PP P+P PP P PPPV+ P PS
Sbjct: 52 SPPPPDVLPTPVYYPPP-PPVYYPPPSPPPVAYPPPTTPS 90
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPT-TVSARDRPP-PVSQPLHLNPS 269
P H P P PP PT S +PP P QP+ +P+
Sbjct: 579 PQHPPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPT 618
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +2
Query: 380 SPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
+P+PS + + P + P P KP P+ +EP ++ P
Sbjct: 83 TPAPSPIPRPPELDPEPKAETDPEADPKPGLDPEPDTNVEPDLELEP 129
>07_01_1153 - 10842259-10842390,10843348-10845315
Length = 699
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 100 RNCSETSCSILKRWSW*FGRANNGAGGTDGWAN 2
R+ S TS + ++W GR NGA G G+ +
Sbjct: 661 RHSSSTSAGLRRKWLKRSGRNGNGATGLGGYCS 693
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
PP P PA PV P+ S PPP P
Sbjct: 205 PPPPPPPLPASSEPVDPSAASLPPLPPPPPPP 236
>07_01_0015 + 108338-109186
Length = 282
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 174 PSPADRPPVIPTTVSARDRPPPVSQPLHLN 263
P P PP++P +A D P P S L ++
Sbjct: 107 PPPPPPPPLLPAAAAAPDSPSPPSLLLQIS 136
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPP 239
PH FP P PP +P + PP
Sbjct: 113 PHDPFPRPPPPPPEMPVGMHPHPHEPP 139
>06_03_0220 + 18276641-18276915,18278445-18278676
Length = 168
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 422 RPPVESDRLGRATGKRTEANASWG*ESSNCLWPPLDWSYRPVAASAASKNPAG 264
RPP A G+ A E S C PP + P+ S + + P+G
Sbjct: 66 RPPPSEAVQPAAAGRARAGRAQERRERSRCSRPPFSEALPPLIPSRSGRRPSG 118
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/67 (34%), Positives = 26/67 (38%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQGRPQA 335
P HQA P PP +P + PPP Q P F G+ P VQ P A
Sbjct: 256 PQHQA--PPPSHPPALPALPAPNAPPPPAPQS---QPPSQFP----GHLPHSQVQSVPPA 306
Query: 336 IRALLAP 356
LAP
Sbjct: 307 PPTPLAP 313
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 180 PADRPPVIPTTVSARDRPPPVSQ 248
P RPP T+V A +PPP SQ
Sbjct: 36 PRPRPPSPSTSVGAAPQPPPHSQ 58
>01_06_1613 +
38643833-38643974,38644054-38644190,38644828-38645207,
38645487-38645583,38645685-38645972,38646683-38647648
Length = 669
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 423 PDPERWIPLVKRSNH 467
PDPERW+P +RS++
Sbjct: 595 PDPERWLPKRERSSY 609
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +3
Query: 147 NSLPP---HQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
N PP Q P P PP +P T PPP S P
Sbjct: 972 NVAPPPFTRQDIPPPPPSPPPLPITQPPSVPPPPNSPP 1009
>01_06_0357 -
28668894-28669238,28669510-28669537,28669578-28669635,
28669836-28669916,28670395-28670526,28670609-28670926,
28672495-28673317
Length = 594
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHL 260
PP P P PP +P T PP S P L
Sbjct: 3 PPPPPPPPPPPSPPRLPLTAHRLPLPPATSPPASL 37
>01_01_0046 - 331758-332627
Length = 289
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPP 239
+S PH P+ PP+ PT +PPP
Sbjct: 44 SSRHPHPTIPAARAAPPLGPTNRRLHQQPPP 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,302,936
Number of Sequences: 37544
Number of extensions: 330159
Number of successful extensions: 2075
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2030
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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