Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1004.Seq
(554 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 37 0.013
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 32 0.27
SB_45142| Best HMM Match : Herpes_IE68 (HMM E-Value=3.8) 32 0.27
SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7) 32 0.27
SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7) 32 0.27
SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7) 32 0.27
SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7) 32 0.27
SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 32 0.27
SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4) 32 0.36
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 32 0.36
SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 31 0.48
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_22760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_9848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 29 1.9
SB_42307| Best HMM Match : AT_hook (HMM E-Value=3.7) 29 1.9
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 1.9
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_653| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.2) 29 1.9
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.4
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 28 4.5
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 4.5
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 28 5.9
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 5.9
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 27 7.8
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 36.7 bits (81), Expect = 0.013
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSAC--GNWPVRPVQ 320
N+ PP AD PPV PTT + PP P PS F A N P PV
Sbjct: 430 NNPPPRPYASQFADAPPVSPTTATPPPPPPSQPPPQQFIPSPQFPEQALQFTNQPAAPVM 489
Query: 321 GRPQA 335
P A
Sbjct: 490 NAPFA 494
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 824 PDHQFRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 878
>SB_45142| Best HMM Match : Herpes_IE68 (HMM E-Value=3.8)
Length = 292
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 210 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 264
>SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 112 PDHQFRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 166
>SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 214
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 86 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 140
>SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 112 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 166
>SB_23956| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 112 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 166
>SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05)
Length = 848
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 720 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 774
>SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4)
Length = 246
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 153 LPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPL 254
LPP + P + PP P+T S+ PPP S PL
Sbjct: 157 LPPPSSSPPLSSPPPPPPSTPSSSLLPPPSSSPL 190
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 1085 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-LTTQLSHGSHPVIPTE 1139
>SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 287
Score = 31.5 bits (68), Expect = 0.48
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ PV P +
Sbjct: 159 PDHQYRTPPPPPRSPERQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHPVIPTE 213
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++PS R TP P T TP I P + ++P P A PS
Sbjct: 25 STPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPS 73
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++PS R TP P T TP I P + ++P P PS
Sbjct: 390 STPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPS 438
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++PS TP + P T TP P + ++P P A PS
Sbjct: 85 STPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPS 133
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++PS TP + P T TP I P + ++P P + PS
Sbjct: 136 STPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPS 184
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSER 529
++PS TP PGT TP P + +P P PS R
Sbjct: 148 STPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTR 198
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++P TP + PGT TP P + ++P R P PS
Sbjct: 160 STPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPS 208
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++P TP + PGT TP P + ++P R P PS
Sbjct: 710 STPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPS 758
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++PS TP + P T TP P + ++P I P PS
Sbjct: 124 STPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPS 172
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++PS TP PGT TP P + ++P P PS
Sbjct: 495 STPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPS 543
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +2
Query: 380 SPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSER 529
+PS TP PGT TP P + +P P PS R
Sbjct: 699 TPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTR 748
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
++P R TP + PGT TP P + ++P P PS
Sbjct: 414 STPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPS 462
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P PGT TP+ + P ++ +PE EP ++P
Sbjct: 3009 PETTVAPGTTVTPQSTVAPETTIAPETTDEPETTVVP 3045
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 380 SPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
S P P PGT P I P ++ +PE + P M+P
Sbjct: 2089 STVPPETTMVPESTVAPGTTIAPETTIAPGTTMAPETTVAPETTMVP 2135
Score = 30.7 bits (66), Expect = 0.84
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
TP P T TP + P ++ +PE +EP M P
Sbjct: 2584 TPESTVTPATTMTPESTVAPGTTMAPESTLEPEKTMTP 2621
Score = 30.7 bits (66), Expect = 0.84
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
TP PGT P ++P + +PE + P +LP
Sbjct: 2596 TPESTVAPGTTMAPESTLEPEKTMTPEITVTPEPTLLP 2633
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +2
Query: 389 PSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P +TP P T P + P ++ +PE + P M P
Sbjct: 4531 PPETTKTPDTTVAPETTMVPESTLAPETTMAPETTVAPETTMAP 4574
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P PGT TP + P ++ +PE + P + P
Sbjct: 3443 PETTVVPGTTPTPESTVAPETTVAPETTVIPETTVAP 3479
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSPERRIEP 502
TP A P T P P ++ +PE +EP
Sbjct: 838 TPETTAAPVTTSVPETTAAPETTVAPETTVEP 869
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P PGT TP+ P ++ +PE + P M P
Sbjct: 2561 PDSTVAPGTTITPKSTELPPTTMTPESTVTPATTMTP 2597
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 392 SRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
S +TP P T P + P ++ +PE + P M P
Sbjct: 4948 SETTKTPDTTVAPETTMVPEGTLAPETTMAPETTVAPETTMAP 4990
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 428 PGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
PGT TP+ P ++ +PE + P M+P
Sbjct: 1967 PGTTITPKSTEVPPTTMTPESTVTPETTMVP 1997
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
T PGT P+ + P +S +PE P ++P
Sbjct: 2942 TSETSVAPGTTVAPKSTVGPETSVAPETTDAPETTVVP 2979
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +2
Query: 380 SPSPSRVGQT---PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
+P + QT P AGP T P + P ++ +PE + P + P
Sbjct: 1096 APETTEAPQTTAAPETTAGPATTLVPETTLAPETTAAPETTMVPDTTVAP 1145
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEP 502
P PGT P + P ++ +PE +EP
Sbjct: 2907 PETTVVPGTTLAPESTVAPETTVAPETTVEP 2937
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P P T TP + P ++ +PE EP +P
Sbjct: 3295 PETTVAPATTVTPESTVAPETTIAPETTDEPETTAVP 3331
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
TP A P T + P ++ PE + PM +LP
Sbjct: 3698 TPETTAVPEATVTQETTVAPETTALPESTVAPMTTVLP 3735
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P PGT P + P ++ +PE I P + + P
Sbjct: 3741 PETTVVPGTTLAPESTVAPETTVAPETTIAPESTVAP 3777
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 174 PSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQGRPQAIR 341
P P+ PP P T+ + PPPV P W + S PVQ RP +R
Sbjct: 322 PPPSQAPPP-PKTIPSTLPPPPVPSATSAPPPWATSNSGPKPLMSTPVQ-RPPGMR 375
>SB_22760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPV 242
PP +++P P R PV+ TT+ R P +
Sbjct: 534 PPTRSWPEPPVRIPVVHTTIPTRSEHPKI 562
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +2
Query: 374 FASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSERFHVYXG 547
+ +P R G TP GA P TP PH +P RR P P Y G
Sbjct: 347 YRGATPYR-GATPYRGATPYRGATPYRGASPHHGATPYRRSTPYHGSTPYRGSTPYRG 403
>SB_9848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGN 299
PP + P D P I S R+ PP + +P H P + + GN
Sbjct: 368 PPPMSEYLPVDEPAPISELPSIREIPP-IQEPTHATPKRLDPKETFGN 414
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +2
Query: 305 GTTSPGAATGNXXXXXXXXXXXXFASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSP 484
GTT+PG GN ++ P T + A PGT ++ ++ ++ +
Sbjct: 467 GTTAPGTTLGNESTVVPGTTISPESTVEPESTIAT-VISAAPGTTESSESTVESLTTAAS 525
Query: 485 ERRIEPMAQMLP 520
E + P + P
Sbjct: 526 ESTVAPGTTLSP 537
>SB_42307| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 269
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + + PV P +
Sbjct: 141 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHDSHPVIPTE 195
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P PGT P + P ++ SPE EP + P
Sbjct: 29 PETTLSPGTTAAPETTVAPETTVSPETIAEPETTVAP 65
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 153 LPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPL 254
L P Q +P RP PT SA+ P P+ +PL
Sbjct: 628 LSPRQTLSAPPSRPKTAPT--SAQRTPEPIRKPL 659
>SB_653| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.2)
Length = 835
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 389 PSRVGQTPPVGAGPGTVDTPRE---AIKPHSSTSPERRIEPMAQMLPSERFH 535
PSR QTP P ++ T E A KP S +RR LPS + H
Sbjct: 558 PSRGHQTPKSNITPSSISTSEEHKIAGKPPRPKSSKRRTSKPTTHLPSSKQH 609
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/71 (25%), Positives = 25/71 (35%)
Frame = +2
Query: 308 TTSPGAATGNXXXXXXXXXXXXFASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPE 487
T +PG G A+ +P P A PG+ P P S+ PE
Sbjct: 174 TVAPGTTVGGKSIAAQETTSAS-ANTAPPGTTVLPESTAAPGSTVLPESTAAPGSTVLPE 232
Query: 488 RRIEPMAQMLP 520
+ P +LP
Sbjct: 233 STVAPGTTVLP 243
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPPV 242
P A P+PA PP + T+SA PPP+
Sbjct: 570 PSSAVPTPATAPPPVAATLSA---PPPL 594
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWP 305
PP P P PP P T D P P P P+ T +C + P
Sbjct: 125 PPTGTLPPPPVTPPPGPETPPPPDTPAPPVPPTEAPPTAPPTGGSCVSKP 174
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +3
Query: 159 PHQAFPSPADRPPVI---PTTVSARDRPPPVSQPLHLNP 266
P + P P PP PTT +R +P P ++P P
Sbjct: 1093 PPRTTPEPTTEPPRTTPEPTTEPSRTKPEPTTEPSRTKP 1131
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
P HQ P P R P T+++ PP S PL NP + T+ + G+ V P +
Sbjct: 1141 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHLVIPTE 1195
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPP 239
PP P+ A PP +P V A PPP
Sbjct: 293 PPFGGHPAAAPPPPPLPAGVPAPPPPPP 320
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 156 PPHQ-AFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWP 305
P HQ P P R P T+++ PP S PL NP + T+ + G+ P
Sbjct: 549 PDHQYRTPPPPPRSPECQPTLNSSPSPPTGSGPLTGNPH-VTTQLSHGSHP 598
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 389 PSRVGQTP--PVGAGPGTVDTPREAIKPHSSTSPERRI 496
P VG T PV PG+ TP+ ++ P S+ +PE +
Sbjct: 3166 PGDVGYTTLAPVVTTPGSDITPQTSVSPDSTVAPESTV 3203
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +2
Query: 410 PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
P PGT P + P ++ +PE P M P
Sbjct: 447 PETTMAPGTTAAPETTMAPETTAAPEATAPPETSMAP 483
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
A+P + V QT + P T P + P ++ +PE + P M P
Sbjct: 2956 AAPDTTMVPQTT---SAPATTMAPETTLAPETTLAPETTMAPETTMAP 3000
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
A+P + V +T V P T D P + P ++ +P+ + P + P
Sbjct: 3022 AAPETTIVPETTSV---PATTDAPATTLAPETTAAPKTTVAPETTVAP 3066
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 505 HWFYSAFW*SRAMWFDRFTRGIHRSGSGAHRWSLT 401
HW + F R WFD F G G G ++T
Sbjct: 1420 HWLAALFTPDRCEWFDSFGFGPEAYGQGIQHITIT 1454
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVS--QPLHLNPSWIF 278
PP P +PP IP R +PPP+ P P IF
Sbjct: 182 PPIPPIDPPRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIF 224
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
PP Q P+PA RP + RPPP +P
Sbjct: 1105 PPRQPKPTPAPRPRSWVESQPELHRPPPPIKP 1136
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +2
Query: 380 SPSPSRVGQT---PPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLP 520
+P + QT P AGP T P + P ++ +PE + P + P
Sbjct: 2611 APETTEAPQTTAAPETTAGPATTLVPETTLAPETTAAPETTMVPDTTVAP 2660
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQGRP 329
SLPP P + PP + + S+ PP S P ++ + T + C RP + R
Sbjct: 731 SLPPPDESPPSSKHPPTV--SPSSSSAPPRPSTPPSVSSAPPQTTNFCDTPGTRPWRYRL 788
Query: 330 QAIRAL 347
Q ++ L
Sbjct: 789 QNLQYL 794
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHL 260
PP P P PP P PPP PLHL
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTPLHL 499
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 383 PSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTS 481
P P R G PP G D PRE P S +S
Sbjct: 140 PPPDRSGYPPPRDYDRGYADRPRERPPPPSYSS 172
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 401 GQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQ 511
G TP V A PGT+ T E P S+ +P+++ E AQ
Sbjct: 225 GDTPAVEAAPGTMVTFDE--PPGSNDTPDQQEEAEAQ 259
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 156 PPHQAFPSPADRPP--VIPTTVSARDR--PPPVSQPLHLNP 266
PP Q P P RPP + P + R PPP+ P+ + P
Sbjct: 300 PPPQYMPHPRMRPPTRIPPPGMGPPPRIPPPPIRAPVDVYP 340
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
PP+ +P P PP P +A PPP P
Sbjct: 151 PPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPP 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,053,671
Number of Sequences: 59808
Number of extensions: 318069
Number of successful extensions: 2090
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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