Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1004.Seq
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       28   0.18 
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            28   0.24 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    27   0.31 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    26   0.95 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   8.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.9  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 0.18
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPS 523
           T P GA PGT   P      H++TS      P     PS
Sbjct: 427 TTPTGANPGTTQPPTSDAPNHTTTSTTTEGNPGTTRPPS 465


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 27.9 bits (59), Expect = 0.24
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 377 ASPSPSRVGQTPPVGAG-PGTVDTPREAIKPHSSTSPERRIEPMAQMLPSERFHV 538
           A  S S +  TPP GAG  GT  + ++   P  S+ P  R     ++  SER  V
Sbjct: 190 AGKSLSNIQPTPPKGAGATGTQHSDQQQEPPRPSSPPAIRRSGTLEVTFSERTFV 244


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 0.31
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +2

Query: 377 ASPSPSRVGQTPPVGAG-PGTVDTPREAIKPHSSTSPERRIEPMAQMLPSERFHV 538
           A  S S +  TPP GAG  GT  + ++   P  S+ P  R     ++  SER  V
Sbjct: 190 AGKSLSNIQPTPPKGAGATGTQHSDQQQELPRPSSPPAIRRSGTLEVTFSERTFV 244


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 177 SPADRPPVIPTTVSARDRPPPVSQ 248
           +P+  PP+ P T+     PPP  Q
Sbjct: 459 TPSSSPPLTPNTICGLIAPPPQQQ 482


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 150  SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPL 254
            S+ PH   P P + P  +PT   ++ +  P+ QPL
Sbjct: 1265 SMGPHT--PPPPNTPNGMPTHQHSQIQLQPIQQPL 1297



 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 383  PSPSRVGQTPPVGAGPGTVDTPREAIKP 466
            P+PS +  TP + +  G++  P+ A +P
Sbjct: 1352 PTPSIISHTPSLSSASGSIG-PKSADQP 1378


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 193 HL*YQQQYQLETDHHQYLNH 252
           HL  QQQ Q +  HHQ   H
Sbjct: 636 HLLQQQQQQQQHQHHQAHQH 655


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 153 LPPHQAFPSPADRPPVIPTTVSARDRPP 236
           LPP +  PS    PP    +   R RPP
Sbjct: 441 LPPGEWDPSIRIEPPAAIPSQEVRKRPP 468


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 131  RCGCKVQSVVTKLFRNELFH 72
            RC   V+SV   LF+ E+FH
Sbjct: 952  RCPGSVESVAHVLFQCEVFH 971


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 187 IDHL*YQQQYQLETDHHQYLNHFT*TPAG 273
           + H  +QQQ Q +   H + +H    PAG
Sbjct: 144 LHHQAHQQQQQQQQQLHHHHHHHHNAPAG 172


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 183 ADRPPVIPTTVSARDRPPPVS 245
           AD PPV P   +  D  PP++
Sbjct: 733 ADLPPVPPNFPTCGDHLPPIN 753


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,969
Number of Sequences: 2352
Number of extensions: 9812
Number of successful extensions: 51
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)