Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1004.Seq
(554 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein. 35 0.22
BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, mem... 35 0.22
AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, mem... 35 0.22
AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein. 35 0.22
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 34 0.39
AB018318-1|BAA34495.2| 639|Homo sapiens KIAA0775 protein protein. 32 1.6
BC030267-1|AAH30267.1| 1158|Homo sapiens ATP13A2 protein protein. 31 2.1
AL049569-7|CAI20367.1| 1158|Homo sapiens ATPase type 13A2 protein. 31 2.1
AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein. 31 2.1
AB209621-1|BAD92858.1| 254|Homo sapiens zinc finger, MYND domai... 31 2.1
BC099724-1|AAH99724.1| 782|Homo sapiens sema domain, immunoglob... 31 3.6
BC098137-1|AAH98137.1| 782|Homo sapiens sema domain, immunoglob... 31 3.6
BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein. 31 3.6
AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein. 31 3.6
AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein. 31 3.6
AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein. 31 3.6
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 30 4.7
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 30 4.7
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 30 4.7
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 30 4.7
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 30 4.7
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 30 4.7
U89355-1|AAC51340.1| 932|Homo sapiens CREB-binding protein prot... 30 6.3
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 30 6.3
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 30 6.3
S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein. 30 6.3
S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrat... 30 6.3
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 30 6.3
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 30 6.3
BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substr... 30 6.3
BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein. 30 6.3
AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 30 6.3
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 30 6.3
AC004760-1|AAC17736.1| 923|Homo sapiens CBP protein. 30 6.3
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 30 6.3
EF088216-1|ABK41888.1| 687|Homo sapiens polyA specific ribonucl... 29 8.3
BC128180-1|AAI28181.1| 687|Homo sapiens PAN3 polyA specific rib... 29 8.3
AL356915-4|CAI12450.2| 741|Homo sapiens PAN3 polyA specific rib... 29 8.3
AL356915-3|CAI12449.2| 687|Homo sapiens PAN3 polyA specific rib... 29 8.3
AL138712-3|CAM20921.1| 741|Homo sapiens PAN3 polyA specific rib... 29 8.3
AL138712-2|CAI14848.1| 687|Homo sapiens PAN3 polyA specific rib... 29 8.3
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 29 8.3
AB109552-1|BAD93184.1| 741|Homo sapiens PABP1-DEPENDENT POLY(A)... 29 8.3
AB107584-1|BAD02262.1| 687|Homo sapiens PABP1-DEPENDENT POLY(A)... 29 8.3
>D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.22
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVS---ARDRPPPVSQPLHLNPSWIFTRSA--CGNWPVRPV- 317
PP A +PA PP P ++ PPP++ PL + PS R+A C PV P+
Sbjct: 366 PPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL-VQPSPPVARAAPVCETVPVHPLP 424
Query: 318 QGRPQAI 338
QG Q +
Sbjct: 425 QGEVQGL 431
>BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 34.7 bits (76), Expect = 0.22
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVS---ARDRPPPVSQPLHLNPSWIFTRSA--CGNWPVRPV- 317
PP A +PA PP P ++ PPP++ PL + PS R+A C PV P+
Sbjct: 358 PPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL-VQPSPPVARAAPVCETVPVHPLP 416
Query: 318 QGRPQAI 338
QG Q +
Sbjct: 417 QGEVQGL 423
>AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 34.7 bits (76), Expect = 0.22
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVS---ARDRPPPVSQPLHLNPSWIFTRSA--CGNWPVRPV- 317
PP A +PA PP P ++ PPP++ PL + PS R+A C PV P+
Sbjct: 358 PPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL-VQPSPPVARAAPVCETVPVHPLP 416
Query: 318 QGRPQAI 338
QG Q +
Sbjct: 417 QGEVQGL 423
>AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein.
Length = 559
Score = 34.7 bits (76), Expect = 0.22
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVS---ARDRPPPVSQPLHLNPSWIFTRSA--CGNWPVRPV- 317
PP A +PA PP P ++ PPP++ PL + PS R+A C PV P+
Sbjct: 358 PPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL-VQPSPPVARAAPVCETVPVHPLP 416
Query: 318 QGRPQAI 338
QG Q +
Sbjct: 417 QGEVQGL 423
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 33.9 bits (74), Expect = 0.39
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPV-SQPLHLNPS 269
PP Q PSP PP+ P+ PPP+ + PL + PS
Sbjct: 194 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPS 232
Score = 32.3 bits (70), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPV-QGRPQ 332
PP Q PSP PP+ P+ PPP PL P S + P+ P+ + PQ
Sbjct: 225 PPLQVPPSPPASPPMSPSAT-----PPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQ 279
Query: 333 AIRALLAP 356
A AL P
Sbjct: 280 APPALATP 287
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPV-SQPLHLNPS 269
PP QA SP PPV P+ PP + + PL + PS
Sbjct: 163 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 201
>AB018318-1|BAA34495.2| 639|Homo sapiens KIAA0775 protein protein.
Length = 639
Score = 31.9 bits (69), Expect = 1.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 153 LPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
+PP PSP R PV P+ + + RPPP P
Sbjct: 426 VPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPP 458
>BC030267-1|AAH30267.1| 1158|Homo sapiens ATP13A2 protein protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.1
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 147 NSLP-PHQAFPSPADRPPVIPTTVS-ARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
NSLP HQ PSPA PP PT++ A PP P P W W +
Sbjct: 1091 NSLPLSHQLDPSPATPPPPPPTSLRLATVYTPPPRPP----PPWGSVDYCPLPWTIPRRG 1146
Query: 321 GRPQAIRALLA 353
G PQ LL+
Sbjct: 1147 GSPQLPSVLLS 1157
>AL049569-7|CAI20367.1| 1158|Homo sapiens ATPase type 13A2 protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.1
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 147 NSLP-PHQAFPSPADRPPVIPTTVS-ARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQ 320
NSLP HQ PSPA PP PT++ A PP P P W W +
Sbjct: 1091 NSLPLSHQLDPSPATPPPPPPTSLRLATVYTPPPRPP----PPWGSVDYCPLPWTIPRRG 1146
Query: 321 GRPQAIRALLA 353
G PQ LL+
Sbjct: 1147 GSPQLPSVLLS 1157
>AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.
Length = 1651
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
P A PSPA+ P+ P +VSAR PPV+ P
Sbjct: 569 PDSAPPSPAEAYPITPASVSAR---PPVAFP 596
>AB209621-1|BAD92858.1| 254|Homo sapiens zinc finger, MYND
domain-containing 10 variant protein.
Length = 254
Score = 31.5 bits (68), Expect = 2.1
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 177 SPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWP 305
SP+ P++P R RP +S P HLNPS +F+ A G+ P
Sbjct: 30 SPSTALPILP-----RLRPCCLSLPTHLNPSALFSPWASGDTP 67
>BC099724-1|AAH99724.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 PPHQAFPS----PADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRS-ACGNWPVRPVQ 320
P HQ P P RP V P+ ++A+ P S + + F R+ WPVRP
Sbjct: 363 PQHQWGPYGGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRH 422
Query: 321 GRPQAIRALLA 353
GRP ++ LA
Sbjct: 423 GRPVLVKTHLA 433
>BC098137-1|AAH98137.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 PPHQAFPS----PADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRS-ACGNWPVRPVQ 320
P HQ P P RP V P+ ++A+ P S + + F R+ WPVRP
Sbjct: 363 PQHQWGPYGGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRH 422
Query: 321 GRPQAIRALLA 353
GRP ++ LA
Sbjct: 423 GRPVLVKTHLA 433
>BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 PPHQAFPS----PADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRS-ACGNWPVRPVQ 320
P HQ P P RP V P+ ++A+ P S + + F R+ WPVRP
Sbjct: 363 PQHQWGPYGGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRH 422
Query: 321 GRPQAIRALLA 353
GRP ++ LA
Sbjct: 423 GRPVLVKTHLA 433
>AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein.
Length = 520
Score = 30.7 bits (66), Expect = 3.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
PP A P P PP PT A P P + P
Sbjct: 76 PPQPAPPPPPAAPPAAPTAAPAAQTPQPPTAP 107
>AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein.
Length = 725
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 PPHQAFPS----PADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRS-ACGNWPVRPVQ 320
P HQ P P RP V P+ ++A+ P S + + F R+ WPVRP
Sbjct: 306 PQHQWGPYGGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRH 365
Query: 321 GRPQAIRALLA 353
GRP ++ LA
Sbjct: 366 GRPVLVKTHLA 376
>AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 30.7 bits (66), Expect = 3.6
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 156 PPHQAFPS----PADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRS-ACGNWPVRPVQ 320
P HQ P P RP V P+ ++A+ P S + + F R+ WPVRP
Sbjct: 363 PQHQWGPYGGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPRH 422
Query: 321 GRPQAIRALLA 353
GRP ++ LA
Sbjct: 423 GRPVLVKTHLA 433
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S PPH F +P PP P PPP+SQP
Sbjct: 354 SFPPHPDFAAPPPPPPP-PAADYPTLPPPPLSQP 386
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S PPH F +P PP P PPP+SQP
Sbjct: 354 SFPPHPDFAAPPPPPPP-PAADYPTLPPPPLSQP 386
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S PPH F +P PP P PPP+SQP
Sbjct: 26 SFPPHPDFAAPPPPPPP-PAADYPTLPPPPLSQP 58
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S PPH F +P PP P PPP+SQP
Sbjct: 482 SFPPHPDFAAPPPLPPP-PAADYPTLPPPPLSQP 514
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S PPH F +P PP P PPP+SQP
Sbjct: 353 SFPPHPDFAAPPPLPPP-PAADYPTLPPPPLSQP 385
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 30.3 bits (65), Expect = 4.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S PPH F +P PP P PPP+SQP
Sbjct: 354 SFPPHPDFAAPPPPPPP-PAADYPTLPPPPLSQP 386
>U89355-1|AAC51340.1| 932|Homo sapiens CREB-binding protein
protein.
Length = 932
Score = 29.9 bits (64), Expect = 6.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 HRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPVIPT-TVSARDRPP 236
H+ R +Q+ Q R L P Q+ PSP PP PT S P
Sbjct: 338 HKLRQQQI---QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 394
Query: 237 PVSQP 251
P +QP
Sbjct: 395 PPAQP 399
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 29.9 bits (64), Expect = 6.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 HRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPVIPT-TVSARDRPP 236
H+ R +Q+ Q R L P Q+ PSP PP PT S P
Sbjct: 1848 HKLRQQQI---QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 1904
Query: 237 PVSQP 251
P +QP
Sbjct: 1905 PPAQP 1909
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 29.9 bits (64), Expect = 6.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 HRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPVIPT-TVSARDRPP 236
H+ R +Q+ Q R L P Q+ PSP PP PT S P
Sbjct: 1848 HKLRQQQI---QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 1904
Query: 237 PVSQP 251
P +QP
Sbjct: 1905 PPAQP 1909
>S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein.
Length = 1243
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGP-----GTVDTPREAIKPHSSTSPE 487
++PS +RVG T P GAG G + E +K HSS S E
Sbjct: 1107 STPSATRVGNTVPFGAGAAVGGGGGSSSSSEDVKRHSSASFE 1148
>S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrate-1
protein.
Length = 1242
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGP-----GTVDTPREAIKPHSSTSPE 487
++PS +RVG T P GAG G + E +K HSS S E
Sbjct: 1106 STPSATRVGNTVPFGAGAAVGGGGGSSSSSEDVKRHSSASFE 1147
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 395 RVGQTP-PVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSE 526
+ QTP P GA D +E+ KP + R + P+ LP E
Sbjct: 3397 KASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREVSPLLPKLPEE 3441
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 395 RVGQTP-PVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSE 526
+ QTP P GA D +E+ KP + R + P+ LP E
Sbjct: 2475 KASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREVSPLLPKLPEE 2519
>BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substrate 1
protein.
Length = 1242
Score = 29.9 bits (64), Expect = 6.3
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGP-----GTVDTPREAIKPHSSTSPE 487
++PS +RVG T P GAG G + E +K HSS S E
Sbjct: 1106 STPSATRVGNTVPFGAGAAVGGGGGSSSSSEDVKRHSSASFE 1147
>BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein.
Length = 520
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 150 SLPPHQAFPS--PADRPPVIPTTVSARDRPPPVSQP 251
++PP PS P PP +P TV PPPV P
Sbjct: 360 TMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 395
>AK127803-1|BAC87142.1| 1063|Homo sapiens protein ( Homo sapiens
cDNA FLJ45904 fis, clone OCBBF3026361. ).
Length = 1063
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLH 257
PPHQ P P +PP PT + +PP + PLH
Sbjct: 570 PPHQVPPQPQTQPP--PT---QQPQPPTQAAPLH 598
>AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ33731 fis, clone BRAWH2017685, moderately
similar to Mus musculus mRNA for nuclear protein ZAP. ).
Length = 723
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 150 SLPPHQAFPS--PADRPPVIPTTVSARDRPPPVSQP 251
++PP PS P PP +P TV PPPV P
Sbjct: 101 TMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 136
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 150 SLPPHQAFPS--PADRPPVIPTTVSARDRPPPVSQP 251
++PP PS P PP +P TV PPPV P
Sbjct: 158 TMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 193
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 395 RVGQTP-PVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSE 526
+ QTP P GA D +E+ KP + R + P+ LP E
Sbjct: 2247 KASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREVSPLLPKLPEE 2291
>AC004760-1|AAC17736.1| 923|Homo sapiens CBP protein.
Length = 923
Score = 29.9 bits (64), Expect = 6.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 HRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPVIPT-TVSARDRPP 236
H+ R +Q+ Q R L P Q+ PSP PP PT S P
Sbjct: 329 HKLRQQQI---QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 385
Query: 237 PVSQP 251
P +QP
Sbjct: 386 PPAQP 390
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 29.9 bits (64), Expect = 6.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 HRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPVIPT-TVSARDRPP 236
H+ R +Q+ Q R L P Q+ PSP PP PT S P
Sbjct: 1878 HKLRQQQI---QHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQ 1934
Query: 237 PVSQP 251
P +QP
Sbjct: 1935 PPAQP 1939
>EF088216-1|ABK41888.1| 687|Homo sapiens polyA specific
ribonuclease subunit homolog protein.
Length = 687
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 125 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 173
>BC128180-1|AAI28181.1| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 125 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 173
>AL356915-4|CAI12450.2| 741|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 741
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 179 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 227
>AL356915-3|CAI12449.2| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 125 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 173
>AL138712-3|CAM20921.1| 741|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 741
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 179 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 227
>AL138712-2|CAI14848.1| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 125 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 173
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 153 LPPHQA---FPSPADRPPVIPTTVSARDRPPPVSQPLHLNPS 269
+PP A P P PP +P SA PPP PL +P+
Sbjct: 319 MPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPA 360
>AB109552-1|BAD93184.1| 741|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3b protein.
Length = 741
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 179 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 227
>AB107584-1|BAD02262.1| 687|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3 protein.
Length = 687
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 SPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRI---EPMAQMLPS 523
SP+ G P + G+ I PH+S +P RR P + M+PS
Sbjct: 125 SPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPS 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,729,307
Number of Sequences: 237096
Number of extensions: 1669718
Number of successful extensions: 12114
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 10491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11988
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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