Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1004.Seq
(554 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 4.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.3
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 377 ASPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSP 484
+SP+ + + Q P GTV P++ P SS P
Sbjct: 1257 SSPATALMLQHAPPAYSCGTVSVPQQQQLPPSSPQP 1292
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 4.8
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 523 GGEHLCHWF 497
GG+H HWF
Sbjct: 19 GGKHTVHWF 27
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 12 PSVPPAPLFARPN 50
P +PPA F PN
Sbjct: 1499 PGIPPAATFLSPN 1511
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 12 PSVPPAPLFARPN 50
P +PPA F PN
Sbjct: 1495 PGIPPAATFLSPN 1507
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 205 QQQYQLETDHHQYLNHF 255
QQQ Q + Q LNH+
Sbjct: 1454 QQQQQQQQQQQQQLNHY 1470
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 97 GNFPPRPIMVRP 108
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 345 GNFPPRPIMVRP 356
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 330 GNFPPRPIMVRP 341
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 294 GNWPVRPVQGRP 329
GN+P RP+ RP
Sbjct: 346 GNFPPRPIMVRP 357
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,503
Number of Sequences: 438
Number of extensions: 3191
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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