Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1004.Seq
(554 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 36 0.018
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 33 0.17
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 32 0.30
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 31 0.39
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 31 0.39
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 31 0.68
At2g42200.2 68415.m05223 squamosa promoter-binding protein-like ... 31 0.68
At2g42200.1 68415.m05222 squamosa promoter-binding protein-like ... 31 0.68
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 31 0.68
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 30 1.2
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 27 1.2
At3g32400.1 68416.m04142 formin homology 2 domain-containing pro... 29 2.1
At1g63570.1 68414.m07186 receptor-like protein kinase-related co... 29 2.1
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 2.1
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 2.8
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 29 2.8
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 29 2.8
At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 29 2.8
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 3.6
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 28 3.6
At3g62410.1 68416.m07011 CP12 domain-containing protein contains... 28 3.6
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 28 3.6
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 28 3.6
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 24 4.3
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 4.8
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 28 4.8
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 4.8
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 4.8
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 4.8
At2g35600.1 68415.m06030 expressed protein 28 4.8
At2g32840.2 68415.m04021 proline-rich family protein Common fam... 28 4.8
At2g32840.1 68415.m04020 proline-rich family protein Common fam... 28 4.8
At1g61080.1 68414.m06877 proline-rich family protein 28 4.8
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 28 4.8
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 25 5.4
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 27 6.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 6.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 6.4
At4g02340.1 68417.m00318 epoxide hydrolase, putative similar to ... 27 6.4
At1g67680.1 68414.m07723 expressed protein 27 6.4
At1g67650.1 68414.m07720 expressed protein 27 6.4
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 6.4
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 27 6.4
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 27 8.4
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 8.4
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +3
Query: 21 PPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQA--FPSPADRP 194
PPA A P+ +Q + HGL+ N P Q FP
Sbjct: 246 PPASAAAPPSLTQQGLPPQQFIQPPASQHGLSPPSLQLPQLPNQFSPQQEPYFPPSGQSQ 305
Query: 195 PVIPTTVSARDRPPPVSQPLHLNP 266
P P T+ +PPP +Q LH P
Sbjct: 306 P--PPTIQPPYQPPPPTQSLHQPP 327
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQPLHLNPSWIFT 281
PP Q P+P PP+ P V P PP+ P+H P+ I++
Sbjct: 153 PPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPVHKPPTPIYS 197
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVS-QPLHLNPS 269
PP Q P+P+ PPV P V P PP+ P+H P+
Sbjct: 136 PPIQKPPTPSYSPPVKPPPVQMPPTPTYSPPIKPPPVHKPPT 177
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTT--VSARDRPPPVSQP 251
PP + P PPV P T S +PPPV +P
Sbjct: 411 PPTPTYSPPIKLPPVKPPTPIYSPPVKPPPVHKP 444
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIP--TTVSARDRPPPVSQP 251
PP + P PPV P T S +PPPV +P
Sbjct: 461 PPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKP 494
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQP 251
PP Q P+P PPV P V P PPV P
Sbjct: 675 PPVQLPPTPTYSPPVKPPPVQVPPTPTYSPPVKPP 709
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQP 251
PP Q P+P PPV P V P PP+ P
Sbjct: 692 PPVQVPPTPTYSPPVKPPPVQVPPTPTYSPPIKPP 726
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQP 251
PP Q P+P PP+ P + P PPV P
Sbjct: 119 PPIQKPPTPTYSPPIYPPPIQKPPTPSYSPPVKPP 153
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQP 251
PP Q P+P PPV P V P PPV P
Sbjct: 271 PPVQTPPTPIYSPPVKPPPVHKPPTPTYSPPVKSP 305
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQPLHLNPSWIFT 281
PP Q P+P PP+ P V P PP+ P P+ I++
Sbjct: 305 PPVQKPPTPTYSPPIKPPPVQKPPTPTYSPPIKPPPVKPPTPIYS 349
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRP---PPVSQP 251
PP Q P+P PPV P V P PPV P
Sbjct: 658 PPVQKPPTPTYSPPVKPPPVQLPPTPTYSPPVKPP 692
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 31.9 bits (69), Expect = 0.30
Identities = 23/82 (28%), Positives = 29/82 (35%)
Frame = +3
Query: 21 PPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLXXXXXXXXXNSLPPHQAFPSPADRPPV 200
PP+P + NH HR V+ Q HH PP ++ P P PP
Sbjct: 104 PPSP--SPDNHRHHRRTTTAAVAGQPPHHRRTTAAAGTTTIAGQPPPPES-PPPESLPPP 160
Query: 201 IPTTVSARDRPPPVSQPLHLNP 266
P + S PP L P
Sbjct: 161 SPESPSPPSPEPPPPSSLEPPP 182
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 31.5 bits (68), Expect = 0.39
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFT 281
PP + P PA PP P V++ PPPV+ P P + T
Sbjct: 71 PPPVSSPPPASPPPATPPPVAS--PPPPVASPPPATPPPVAT 110
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PP A P PP + T + PPPVS P +P
Sbjct: 46 PPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASP 82
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +3
Query: 174 PSPADRPPVIPTTVSARDRPPPVS--QPLHLNPSWIFTRSACGNWPVRPVQGRPQA 335
P A P PTT PPPVS P+ +P + T N P PV P A
Sbjct: 26 PPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPAN-PPPPVSSPPPA 80
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPV-SQPLHLNP 266
PP P PA PP + PPPV + P NP
Sbjct: 33 PPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANP 70
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 31.5 bits (68), Expect = 0.39
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFT 281
PP + P PA PP P V++ PPPV+ P P + T
Sbjct: 71 PPPVSSPPPASPPPATPPPVAS--PPPPVASPPPATPPPVAT 110
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PP A P PP + T + PPPVS P +P
Sbjct: 46 PPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASP 82
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +3
Query: 174 PSPADRPPVIPTTVSARDRPPPVS--QPLHLNPSWIFTRSACGNWPVRPVQGRPQA 335
P A P PTT PPPVS P+ +P + T N P PV P A
Sbjct: 26 PPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPAN-PPPPVSSPPPA 80
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPV-SQPLHLNP 266
PP P PA PP + PPPV + P NP
Sbjct: 33 PPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANP 70
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 30.7 bits (66), Expect = 0.68
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 21 PPAPLFARPNHHDHRFRMEQLVS 89
PP+ + P HHDH+ ++E ++S
Sbjct: 125 PPSEVIDVPQHHDHKLKLEMVIS 147
>At2g42200.2 68415.m05223 squamosa promoter-binding protein-like 9
(SPL9) identical to squamosa promoter binding
protein-like 9 [Arabidopsis thaliana] GI:5931673;
contains Pfam profile PF03110: SBP domain
Length = 369
Score = 30.7 bits (66), Expect = 0.68
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 204 PTTVSARDRPPPVSQPLHLNPSWIF 278
P TV+ PP SQ +LNP W+F
Sbjct: 285 PMTVTMAQPPPAPSQHQYLNPPWVF 309
>At2g42200.1 68415.m05222 squamosa promoter-binding protein-like 9
(SPL9) identical to squamosa promoter binding
protein-like 9 [Arabidopsis thaliana] GI:5931673;
contains Pfam profile PF03110: SBP domain
Length = 375
Score = 30.7 bits (66), Expect = 0.68
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 204 PTTVSARDRPPPVSQPLHLNPSWIF 278
P TV+ PP SQ +LNP W+F
Sbjct: 285 PMTVTMAQPPPAPSQHQYLNPPWVF 309
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVI--PTTVSARDRPPPVSQPLHLNP 266
PP +P P RPP I P + +PPPV+ P L P
Sbjct: 107 PPPVVYPPPIVRPPPITRPPIIIPPIQPPPVTTPPGLLP 145
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPP------VIPTTVSARDRPPPVSQPLHLN 263
SLPP P P PP + P+ R PPP PLH +
Sbjct: 77 SLPPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPPLHFS 120
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PP P P PPV TT PP P P
Sbjct: 154 PPPPPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTP 190
Score = 21.8 bits (44), Expect(2) = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Frame = +3
Query: 3 LAHPSVPPAPLFA--RPNHHDHR 65
L P PP PL A HH HR
Sbjct: 95 LRPPPPPPPPLSAITTTGHHHHR 117
>At3g32400.1 68416.m04142 formin homology 2 domain-containing
protein / FH2 domain-containing protein common family
members: At2g43800, At3g25500, At5g48360, At4g15200,
At3g05470, At3g07540, At5g07780, At5g07650 [Arabidopsis
thaliana];
Length = 488
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSA-RDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQGRPQ 332
P H A S PP+ P + A + PPP PLH N S+ ++G+ Q
Sbjct: 23 PHHSALSSSPLPPPLPPKKLLATTNTPPPPPPPLHSNSQMGAPTSSLVLKSPHNLKGQGQ 82
Query: 333 AIRALLAP 356
+A L P
Sbjct: 83 TRKANLKP 90
>At1g63570.1 68414.m07186 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function DUF26; similar to receptor-like protein kinase
4 (GI:13506745) [Arabidopsis thaliana]
Length = 284
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 174 PSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PSP+ PP+ PT+ PP + PL P
Sbjct: 249 PSPSSLPPISPTSSPPLSLPPQLPPPLSQPP 279
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 150 SLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
S+PP A P P PP P S+R P P + P
Sbjct: 586 SIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPP 619
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 162 HQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
HQ PP P + +R PPP++QP
Sbjct: 565 HQPINKTPPPPPPPPPPLPSRSIPPPLAQP 594
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 156 PPHQAF--PSPADRPPVIPTT-VSARDRPPPVSQP 251
PP A P+P+ +PP +PTT + PPV P
Sbjct: 47 PPSPALKPPTPSYKPPTLPTTPIKPPTTKPPVKPP 81
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
P P +PPV P T+ PPVS P
Sbjct: 65 PTTPIKPPTTKPPVKPPTIPVTPVKPPVSTP 95
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 21 PPAPLFARPNHHDHRFRMEQLVS 89
PP+ + P HHDH+ ++E + S
Sbjct: 85 PPSEVIDVPQHHDHKLKLEMVKS 107
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 144
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHL 260
PP A P P PP P VS+ PPP + L++
Sbjct: 69 PPPPACPPPPALPPPPPKKVSSYCPPPPPANFLYI 103
>At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein similar to human splicing
factor GB:CAA59494 GI:899298 from [Homo sapiens];
contains Pfam profile PF01805: Surp module
Length = 735
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 168 AFPSPADRPPVIPTTVSARDRPPPVSQPLHL 260
+FP PA PP P + R PPP + L+L
Sbjct: 526 SFPGPAAFPPPRPGVPTVRPLPPPQNLALNL 556
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +3
Query: 153 LPPHQAFPSPADRPPVIP---TTVSARDRPPPVSQPLHLNPS 269
LP H A P P PP P T + PPP L+PS
Sbjct: 763 LPTHSASPPPPTAPPPPPLGQTRAPSAPPPPPPKLGTKLSPS 804
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPT-TVSARDRPPP 239
NSLPP + SP P P+ TV+ + PPP
Sbjct: 338 NSLPPPYVYNSPPPPPYYSPSPTVNYKSPPPP 369
>At3g62410.1 68416.m07011 CP12 domain-containing protein contains
Pfam domain PF02672: CP12 domain
Length = 131
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 213 VSARDRPPPVSQPLHLNPSW-IFTRSACGNWPVRPVQGRPQ 332
V++ +RP ++ P+HLN SW + +R+ ++P++ P+
Sbjct: 17 VTSENRPVCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPE 57
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +3
Query: 147 NSLPPHQAF---PSPADRPPVIPTTVSARDRPPPVSQP 251
NS PP + F P PAD P PPP S P
Sbjct: 116 NSPPPPEVFEPPPPPADEDESPPAPPPPEQLPPPASSP 153
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 153 LPPHQAFPSPADRPPVIPTTVSAR-DRPPPVS 245
L P + P P D PP IP D PPP S
Sbjct: 83 LTPPPSSPPPPDAPPPIPIVFPPPIDSPPPES 114
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSAR-DRPPPVSQPLHLNPSWIFTRSACGNWPV 308
P QA RP +P VS+ +P P+ QP H P + + C PV
Sbjct: 98 PAQAQAPALVRPAPVPVLVSSSAPQPMPMWQPYHCGPYYEAQQYQCYGRPV 148
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSA 221
P+ P P RP PT VSA
Sbjct: 430 PYPQQPGPGSRPAPSPTAVSA 450
Score = 22.6 bits (46), Expect(2) = 4.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 153 LPPHQAFPSP 182
+PPHQ++P P
Sbjct: 386 MPPHQSYPPP 395
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRP-PVIPTTVSARDRPPPVSQPLHLNP 266
PPHQ PSP P P P+ +PPP P H+ P
Sbjct: 51 PPHQPPPSPYPHPHPPPPSPYPHPHQPPP---PPHVLP 85
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 156 PPHQAFPSPADRPP-VIPTTVSARDRPPPVSQPLHLNPS 269
PP A P+PA PP V P+ PP + ++PS
Sbjct: 60 PPPAATPAPATTPPSVAPSPADVPTASPPAPEGPTVSPS 98
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 4.8
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 156 PPHQAFP---SPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPV--RPVQ 320
P H+ P +P +P +PTT + P P + P+H PS + PV RPVQ
Sbjct: 435 PVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTT-PVH-EPSPVLATPVDKPSPVPSRPVQ 492
Query: 321 GRPQ 332
+PQ
Sbjct: 493 -KPQ 495
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PP P P PP P V PPP S P ++ P
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYP 426
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIF 278
PP +PSP PP P V PPP P +P +++
Sbjct: 405 PPPYVYPSPPPPPPSPPPYVYP-PPPPPYVYPPPPSPPYVY 444
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPP 239
PPH ++ PA PP P T PPP
Sbjct: 122 PPHYSYQEPAQYPP--PETKPQEPLPPP 147
>At2g35600.1 68415.m06030 expressed protein
Length = 331
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWI 275
PH + P D + T S+RD PP +S + W+
Sbjct: 244 PHHFYGPPMDAARI---TTSSRDEPPSMSNASEMQGEWV 279
>At2g32840.2 68415.m04021 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 291
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 380 SPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSERFH 535
+PS S TP V A V P I P S P+ + P R H
Sbjct: 13 NPSVSVAVSTPIVTASESPVTQPNTVITPSSQPQPQTPASSYRAIAPLHRHH 64
>At2g32840.1 68415.m04020 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 337
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 380 SPSPSRVGQTPPVGAGPGTVDTPREAIKPHSSTSPERRIEPMAQMLPSERFH 535
+PS S TP V A V P I P S P+ + P R H
Sbjct: 13 NPSVSVAVSTPIVTASESPVTQPNTVITPSSQPQPQTPASSYRAIAPLHRHH 64
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 159 PHQAFPSPADRPPVIPTTVSARDRPPP 239
P + P PP +PTT++A PPP
Sbjct: 502 PLKGSAPPPPPPPPLPTTIAAPPPPPP 528
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 168 AFPSPADRPPVIPTTVSARDRPPPVSQPLHL 260
+FP PA PP P R PPP + L+L
Sbjct: 538 SFPGPAALPPPRPGVPIVRPLPPPPNLALNL 568
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 25.0 bits (52), Expect(2) = 5.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLH 257
PP ++ P P D P + V R PPP QP H
Sbjct: 411 PPKES-PQPND--PYNQSPVKFRRSPPPPQQPHH 441
Score = 21.0 bits (42), Expect(2) = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 234 PPVSQPLHLNPS 269
PP S P+H PS
Sbjct: 453 PPTSPPVHSTPS 464
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNPSWIFTRSACGNWPVRPVQGRPQ 332
PP Q P P PP A D+PPP Q P T A P+ P PQ
Sbjct: 45 PPPQPDPQPPT-PPTFQPAPPANDQPPPPPQSTS-PPPVATTPPALPPKPLPPPLSPPQ 101
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPVSQPLHLNP 266
PP Q+ P + P P TV PPP P H +P
Sbjct: 745 PPPQSHPPCIEYSPPPPPTVHY--NPPPPPSPAHYSP 779
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQP 251
+S PP + P P PP I +S P PVS P
Sbjct: 567 HSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSP 601
>At4g02340.1 68417.m00318 epoxide hydrolase, putative similar to
epoxide hydrolases from Glycine max GI:2764806, Solanum
tuberosum GI:407938; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 324
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 171 FPSPADRPPVIPTTVSARDRPPPVSQPLHL 260
F S RPP IP +V R P P S P L
Sbjct: 177 FTSRNPRPPCIPKSVGFRGLPDPPSLPAWL 206
>At1g67680.1 68414.m07723 expressed protein
Length = 664
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 423 PDPERWIPLVKRSNH 467
PDPERW+P +RS++
Sbjct: 593 PDPERWLPRRERSSY 607
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 423 PDPERWIPLVKRSNH 467
PDPERW+P +RS++
Sbjct: 579 PDPERWLPRRERSSY 593
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPL-HLNPS 269
+S PP PS PP + + S+ PPP S PL L+PS
Sbjct: 46 SSAPPSSLSPSS---PPPLSLSPSSPPPPPPSSSPLSSLSPS 84
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 147 NSLPPHQAFPSPADRPPVIPTTVSARDRPPPVSQPL-HLNPS 269
+S PP PS PP + + S+ PPP S PL L+PS
Sbjct: 95 SSAPPSSLSPSS---PPPLSLSPSSPPPPPPSSSPLSSLSPS 133
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 156 PPHQAFPSPADRPPVIPTTVSARDRPPPV 242
P + A SP PPV V+A PPPV
Sbjct: 624 PTYYAVQSPPPPPPVYYPPVTASPPPPPV 652
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 407 TPPVGAGPGTVDTPREAIKPHSSTSP 484
TPP A P TP A+ P ++SP
Sbjct: 39 TPPPAATPAPTTTPPPAVSPAPTSSP 64
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 165 QAFPSPADRPPVIPTTVSARDRPPPVSQP 251
Q PSP RP P ++ PPPVSQP
Sbjct: 79 QRGPSPMSRPGP-PAGMARPGGPPPVSQP 106
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,219,386
Number of Sequences: 28952
Number of extensions: 221009
Number of successful extensions: 1333
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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