Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1001.Seq
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   0.78 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.2  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.3  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 332 FNFNKGPVPAFYHRSVNIYLRNL 264
           FNF++GPV      + ++++++L
Sbjct: 101 FNFSQGPVKIMLQNATDLFIKSL 123


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 267 VT*INVHTSMIKSRYRPFIEIKKKNPHLIYQILIS 371
           +T +N    +IK  YR   ++KK+ P L  ++L+S
Sbjct: 72  LTPLNEQFDVIKDNYRKVTDLKKRFPKL--KVLLS 104


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 227 LDNN*TFI*NLSLSYVNKCSHFYD 298
           +DN+  F  NL  S+ N+CS   D
Sbjct: 202 IDNSYQFCDNLQYSFDNQCSGTID 225


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 227 LDNN*TFI*NLSLSYVNKCSHFYD 298
           +DN+  F  NL  S+ N+CS   D
Sbjct: 193 IDNSYQFCDNLQYSFDNQCSGTID 216


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 354 YQILISSTVFLPSLRSSFRIKTYYNLKTY 440
           ++  +S T +LP +R+  + K  +  +TY
Sbjct: 25  WENFVSETSYLPFIRALGKSKKEFKTRTY 53


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 354 YQILISSTVFLPSLRSSFRIKTYYNLKTY 440
           ++  +S T +LP +R+  + K  +  +TY
Sbjct: 258 WENFVSETSYLPFIRALGKSKKEFKTRTY 286


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 354 YQILISSTVFLPSLRSSFRIKTYYNLKTY 440
           ++  +S T +LP +R+  + K  +  +TY
Sbjct: 258 WENFVSETSYLPFIRALGKSKKEFKTRTY 286


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 206 ILLFLSQLFRGLNQLKDVKDLKVFY 132
           +L  L QLF  L Q+K+  +   FY
Sbjct: 299 LLFILIQLFNSLRQMKNNLERIYFY 323


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 206 ILLFLSQLFRGLNQLKDVKDLKVFY 132
           +L  L QLF  L Q+K+  +   FY
Sbjct: 299 LLFILIQLFNSLRQMKNNLERIYFY 323


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 206 ILLFLSQLFRGLNQLKDVKDLKVFY 132
           +L  L QLF  L Q+K+  +   FY
Sbjct: 299 LLFILIQLFNSLRQMKNNLERIYFY 323


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 388 GKKTVLEISI**IRCGFFF 332
           G+KT L +SI    CG+ F
Sbjct: 36  GQKTCLNLSINYCICGYIF 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,322
Number of Sequences: 336
Number of extensions: 1946
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)