Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1001.Seq
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF399580-1|AAK95065.1|  213|Homo sapiens olfactory receptor prot...    30   6.5  
AB065847-1|BAC06065.1|  303|Homo sapiens seven transmembrane hel...    30   6.5  

>AF399580-1|AAK95065.1|  213|Homo sapiens olfactory receptor
           protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 139 FFTVFTFNSFKPSNTLPFEKML 74
           FF    FNS +PS TLP +KM+
Sbjct: 183 FFGPCVFNSLRPSTTLPIDKMV 204


>AB065847-1|BAC06065.1|  303|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 303

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 139 FFTVFTFNSFKPSNTLPFEKML 74
           FF    FNS +PS TLP +KM+
Sbjct: 242 FFGPCVFNSLRPSTTLPIDKMV 263


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,770,933
Number of Sequences: 237096
Number of extensions: 955516
Number of successful extensions: 1017
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)