Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0997.Seq
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 355 KFSPKQIQNSFNAE 396
           +F P QI+++FN E
Sbjct: 410 RFEPPQIRHAFNEE 423


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 341 IHNQTNSPPNKFKIAL 388
           +H Q N PP+K  IA+
Sbjct: 634 LHRQFNLPPSKDTIAV 649


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -1

Query: 147 FIYXEXF**IHVIILI*QFXFCVCXLMFCDLIS 49
           F + E F  IH+ + +      +  +M CD+++
Sbjct: 204 FTFEETFAIIHLSVFVYTLVSVILIIMGCDVVA 236


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 463 KDW*VQ*NNFMIFYSWIIGCYRRINV 540
           KDW       M  Y W  G  RR+NV
Sbjct: 131 KDWSCV-EVMMASYGWPAGLNRRLNV 155


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 463 KDW*VQ*NNFMIFYSWIIGCYRRINV 540
           KDW       M  Y W  G  RR+NV
Sbjct: 131 KDWSCV-EVMMASYGWPAGLNRRLNV 155


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 174 LSYLXIVLSFIYXEXF**IHVIILI*QFXFCVCXLMFC 61
           L  L  +  F Y      +H+++L+  + F    L+FC
Sbjct: 232 LIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 463 KDW*VQ*NNFMIFYSWIIGCYRRINV 540
           KDW       M  Y W  G  RR+NV
Sbjct: 131 KDWSCV-EVMMASYGWPAGLNRRLNV 155


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -2

Query: 281 SCVLLIFKLKSXSVFQIPSMH*IHIKICMFWENLYFYXI 165
           S +L+I + K    F    +   H     FW  LYF  I
Sbjct: 203 SPMLVIAEYKQLDYFDGSKVPACHTLANTFWSALYFLTI 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,757
Number of Sequences: 336
Number of extensions: 2449
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)