Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0997.Seq
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   1.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.0  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    23   9.0  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 350  DYVYLXMLK*GLVHVFLFY*IVLSCVLLIFKLKSXSVFQI 231
            DY++L  +    VH+F    I L+C  +++ +KS S+  I
Sbjct: 971  DYMFLRQVPIRRVHLFTM--IQLACFAVLWLIKSFSITSI 1008


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 540 HIYPSIASDYP*IKYHKIILLYSPIFSCILSQ 445
           H    ++S +P ++Y   ++L S I  C+L Q
Sbjct: 834 HCAIKVSSAFPTVRYQTAVVLASMIPICLLVQ 865


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 454 IVPSHNHGLEGTTRAL 407
           ++PSH  G+ GTT  +
Sbjct: 210 VIPSHQTGILGTTEGM 225


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 219 LNTHKNMYVLGESLF 175
           +N+ +N+Y+LG S F
Sbjct: 26  INSSRNLYILGVSFF 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,292
Number of Sequences: 2352
Number of extensions: 8520
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)