Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0997.Seq
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA...    28   7.4  
AE014297-763|AAF54249.1|  412|Drosophila melanogaster CG11742-PA...    28   7.4  

>AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA
            protein.
          Length = 1570

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
 Frame = -1

Query: 498  YHKIILLYSPIFSCILSQ--VIITALKELPEH*AGHFCIKAILNLFGGEFV*LCISXNAK 325
            Y    +LY  +F  I     V++ AL E P H    +   ++  + GG +V L     A 
Sbjct: 1125 YWTFTVLYDLLFLLIFCACVVVMVALYENPNHDVMLYGYISVTLMLGGFWVILLAYLMAS 1184

Query: 324  VGVSTCFSFL----LNST-VMCFAHF 262
            +  + C+ FL    +NS  ++CF+ F
Sbjct: 1185 LCRNPCYGFLWLCGINSIGLVCFSQF 1210


>AE014297-763|AAF54249.1|  412|Drosophila melanogaster CG11742-PA
           protein.
          Length = 412

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 348 LCISXNAKVGVSTCFSFLLNSTVMCFAHFQAEIDXCFSN 232
           LC   N   GVS   +F+ +S ++CF  FQ  I     N
Sbjct: 276 LCQDINEIFGVSLLSNFVSSSFIICFVGFQMTIGSKIDN 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,643,815
Number of Sequences: 53049
Number of extensions: 379021
Number of successful extensions: 537
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)