Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0995.Seq
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB...    38   0.12 
UniRef50_Q6ZPB1 Cluster: CDNA FLJ26142 fis, clone TST04526; n=3;...    36   0.82 
UniRef50_Q9NUB4 Cluster: Uncharacterized protein C20orf141; n=5;...    36   0.82 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   3.3  
UniRef50_Q4WAZ6 Cluster: Cytochrome P450 oxidoreductase OrdA-lik...    33   4.4  
UniRef50_UPI00004D5D9E Cluster: Ribosomal protein S6 kinase-like...    33   5.8  
UniRef50_Q9VLT6 Cluster: CG7466-PA; n=3; Sophophora|Rep: CG7466-...    33   5.8  
UniRef50_Q5CRN4 Cluster: Chromatin associated proein with a chro...    33   5.8  
UniRef50_Q5CPU6 Cluster: Signal peptide plus transmembrane domai...    33   5.8  
UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p...    32   7.6  

>UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB,
            isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG31025-PB, isoform B - Tribolium castaneum
          Length = 1307

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 257  PKNMGWNWTA-EDIPGMKPRPKWKPGAANKILVRRYRALRE 376
            P  MGW W        +KPR  W+PGA  KI+  R R  RE
Sbjct: 1096 PPRMGWLWNIFTPCLNLKPRRGWRPGAIAKIVAERIRKHRE 1136


>UniRef50_Q6ZPB1 Cluster: CDNA FLJ26142 fis, clone TST04526; n=3;
           Eutheria|Rep: CDNA FLJ26142 fis, clone TST04526 - Homo
           sapiens (Human)
          Length = 254

 Score = 35.5 bits (78), Expect = 0.82
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 322 PFRPWLHSWYVFCRPIPSHVLWKGGYGYLISCFFSTTTGSMLIAFRGYFSFSLTCR 155
           P RP + +W      +   VLW G  G  I   FSTT  ++L+    + +F L  R
Sbjct: 32  PVRPPVSTWGPSWAQLLDSVLWLGALGLTIQAVFSTTGPALLLLLVSFLTFDLLHR 87


>UniRef50_Q9NUB4 Cluster: Uncharacterized protein C20orf141; n=5;
           Eutheria|Rep: Uncharacterized protein C20orf141 - Homo
           sapiens (Human)
          Length = 165

 Score = 35.5 bits (78), Expect = 0.82
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 322 PFRPWLHSWYVFCRPIPSHVLWKGGYGYLISCFFSTTTGSMLIAFRGYFSFSLTCR 155
           P RP + +W      +   VLW G  G  I   FSTT  ++L+    + +F L  R
Sbjct: 32  PVRPPVSTWGPSWAQLLDSVLWLGALGLTIQAVFSTTGPALLLLLVSFLTFDLLHR 87


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
 Frame = +2

Query: 14  NP*TQPTEFLAGSSQ*VAFPIRW*ILRSTALARANVNNVPGLSPVSSPTRQGEAEIT--- 184
           NP TQP +FLAGSSQ   F        +  L    + N   LSP   P R   A I    
Sbjct: 69  NPKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNRPRVAGIAFRL 128

Query: 185 -SEGYQHRTSCS 217
            +  Y+ +T CS
Sbjct: 129 PANRYEEKTVCS 140


>UniRef50_Q4WAZ6 Cluster: Cytochrome P450 oxidoreductase OrdA-like,
           putative; n=1; Aspergillus fumigatus|Rep: Cytochrome
           P450 oxidoreductase OrdA-like, putative - Aspergillus
           fumigatus (Sartorya fumigata)
          Length = 536

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 278 WTAEDIPGMKPRPKWKPGAANKILVRRYRALRE 376
           W  + +P +K  P W PG + +   R++RA+ E
Sbjct: 220 WAVDSVPAIKYLPDWFPGMSYRKTARKWRAINE 252


>UniRef50_UPI00004D5D9E Cluster: Ribosomal protein S6 kinase-like 1
           (EC 2.7.11.1).; n=2; Xenopus tropicalis|Rep: Ribosomal
           protein S6 kinase-like 1 (EC 2.7.11.1). - Xenopus
           tropicalis
          Length = 476

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 366 ALYLLTNILLAAPGFHLGLGFIPGMSSAVQFHPMFFG 256
           A+ LLT +L   PG  LG G  PG +  ++ HP F+G
Sbjct: 435 AISLLTELLCYDPGKRLGSG--PGGAQKIKTHPFFYG 469


>UniRef50_Q9VLT6 Cluster: CG7466-PA; n=3; Sophophora|Rep: CG7466-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 2898

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 17/61 (27%), Positives = 23/61 (37%)
 Frame = +2

Query: 131 PGLSPVSSPTRQGEAEITSEGYQHRTSCS*KETGNQVSISSFPKNMGWNWTAEDIPGMKP 310
           P     + P R GE++      +    CS   +G    +S  P    W W A D  GM  
Sbjct: 174 PDCEDEACPQRCGESQGRGRCQKSICHCSRGYSGRLCDLSDHPAGSSWRWLATDAEGMTA 233

Query: 311 R 313
           R
Sbjct: 234 R 234


>UniRef50_Q5CRN4 Cluster: Chromatin associated proein with a
           chromodomain at the C-terminus; n=2;
           Cryptosporidium|Rep: Chromatin associated proein with a
           chromodomain at the C-terminus - Cryptosporidium parvum
           Iowa II
          Length = 1075

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +2

Query: 302 MKPRPKWKPGAANKILVRRYRALREGVRCFSQEKESPAAKKEKDRA*TDNCGYXKKTEST 481
           ++P  KW+PG  N    +  + + +   C SQE+  P   +E + + T N    K+T  T
Sbjct: 696 LRPNAKWRPGRGNSSKSQATKRICKSDPC-SQEQYKPLNDEEMNLSATVNLNNIKETIKT 754

Query: 482 Q 484
           Q
Sbjct: 755 Q 755


>UniRef50_Q5CPU6 Cluster: Signal peptide plus transmembrane domain
           or GPI anchor, proline rich, acidic stretches; n=2;
           Cryptosporidium|Rep: Signal peptide plus transmembrane
           domain or GPI anchor, proline rich, acidic stretches -
           Cryptosporidium parvum Iowa II
          Length = 861

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 20/74 (27%), Positives = 35/74 (47%)
 Frame = +2

Query: 107 ARANVNNVPGLSPVSSPTRQGEAEITSEGYQHRTSCS*KETGNQVSISSFPKNMGWNWTA 286
           A  NV +      +++  + G   I + G+ ++ S S  +  NQ  I S PK+       
Sbjct: 283 ANQNVIHPKPTMKMNNIQQSGGIAINNVGFVNQRSLSTNQIQNQNVIKSMPKSQPKTVIL 342

Query: 287 EDIPGMKPRPKWKP 328
           + +P  +P+PK KP
Sbjct: 343 QTVPITQPKPKPKP 356


>UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p -
           Drosophila melanogaster (Fruit fly)
          Length = 998

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 257 PKNMGWNWTAEDIPGMKPRPKWKPGAANK 343
           P +MGW WTA  +     +P W+PGA  +
Sbjct: 604 PSHMGWLWTAHPLAN---KPGWRPGAIRR 629


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,474,474
Number of Sequences: 1657284
Number of extensions: 8913890
Number of successful extensions: 25323
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25316
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)