Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0995.Seq
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014591-1|AAH14591.1|  165|Homo sapiens chromosome 20 open read...    36   0.12 
AL035460-4|CAB82247.1|  165|Homo sapiens chromosome 20 open read...    36   0.12 
AK129653-1|BAC85208.1|  254|Homo sapiens protein ( Homo sapiens ...    36   0.12 

>BC014591-1|AAH14591.1|  165|Homo sapiens chromosome 20 open reading
           frame 141 protein.
          Length = 165

 Score = 35.5 bits (78), Expect = 0.12
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 322 PFRPWLHSWYVFCRPIPSHVLWKGGYGYLISCFFSTTTGSMLIAFRGYFSFSLTCR 155
           P RP + +W      +   VLW G  G  I   FSTT  ++L+    + +F L  R
Sbjct: 32  PVRPPVSTWGPSWAQLLDSVLWLGALGLTIQAVFSTTGPALLLLLVSFLTFDLLHR 87


>AL035460-4|CAB82247.1|  165|Homo sapiens chromosome 20 open reading
           frame 141 protein.
          Length = 165

 Score = 35.5 bits (78), Expect = 0.12
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 322 PFRPWLHSWYVFCRPIPSHVLWKGGYGYLISCFFSTTTGSMLIAFRGYFSFSLTCR 155
           P RP + +W      +   VLW G  G  I   FSTT  ++L+    + +F L  R
Sbjct: 32  PVRPPVSTWGPSWAQLLDSVLWLGALGLTIQAVFSTTGPALLLLLVSFLTFDLLHR 87


>AK129653-1|BAC85208.1|  254|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26142 fis, clone TST04526. ).
          Length = 254

 Score = 35.5 bits (78), Expect = 0.12
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 322 PFRPWLHSWYVFCRPIPSHVLWKGGYGYLISCFFSTTTGSMLIAFRGYFSFSLTCR 155
           P RP + +W      +   VLW G  G  I   FSTT  ++L+    + +F L  R
Sbjct: 32  PVRPPVSTWGPSWAQLLDSVLWLGALGLTIQAVFSTTGPALLLLLVSFLTFDLLHR 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,460,529
Number of Sequences: 237096
Number of extensions: 1396158
Number of successful extensions: 7169
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7163
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)