Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0994.Seq
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 33 0.12
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_9233| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 31 0.47
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 31 0.63
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 1.9
SB_29147| Best HMM Match : TAFH (HMM E-Value=4.1) 29 1.9
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08) 29 3.3
SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10) 28 4.4
SB_53153| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_52647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_47832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_47703| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.4
SB_46172| Best HMM Match : Peptidase_C54 (HMM E-Value=1) 28 4.4
SB_26228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_22822| Best HMM Match : TAFH (HMM E-Value=2.5) 28 4.4
SB_21906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_19945| Best HMM Match : TAFH (HMM E-Value=2.8) 28 4.4
SB_15092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 28 4.4
SB_10973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_4050| Best HMM Match : VPEP (HMM E-Value=3.6) 28 4.4
SB_53614| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_52400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_31385| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.4
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.4
SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_25461| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.4
SB_16161| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.4
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 28 4.4
SB_4692| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 4.4
SB_367| Best HMM Match : GIY-YIG (HMM E-Value=7) 28 4.4
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11) 28 5.8
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066) 27 7.7
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 27 7.7
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 27 7.7
SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 7.7
SB_19628| Best HMM Match : DUF1542 (HMM E-Value=8.3) 27 7.7
SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002) 27 7.7
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 27 7.7
SB_6571| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 242 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQRE--KERVWKNQKKGTASSRLSPS 69
+P+E+ ++E +EKK + +KT + + +P N +++ RV + Q + R +P
Sbjct: 692 LPTEKKKKEKREKKERKREKKTRRARTPVEEPENFEKDVPLPRVHEEQDQVEKEHRRTPD 751
Query: 68 RWVNP 54
P
Sbjct: 752 GTQEP 756
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3
Query: 227 NQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 69
N+ + K KK K +M+K +K ++ T DPP + R K R + G+ +S S
Sbjct: 1089 NKSKKKSKKDKKSMKKASKHRKETGDPPML-RAKIRGIGSPVSGSFQRTISES 1140
>SB_9233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKRKSMKNVGP 275
N N+RRIP T + +PN N ++R+ + + P
Sbjct: 44 NNHKNSRRIPFVTTYNPTLPNINNIIRRREVGKIDP 79
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = -3
Query: 209 EKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 69
+K +K +KT+K ++ PN +R++++ K +KK ASS++ P+
Sbjct: 367 KKGTKRGKKKTSKDATEESEAPNKKRKEKK--KKKKKKKASSKIEPT 411
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 236 SERNQREVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQKK 99
S++ +E K++K K M+K K K +T + ++EKE+ K +K+
Sbjct: 129 SDKELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKE 175
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 242 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTA 90
V E+ E KEK A R + +GK+ Q +K K +KK A
Sbjct: 926 VADEQPAEEAKEKSKPAGRRASRRGKKQATQVEESQEDKTDAEKEKKKPKA 976
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -3
Query: 230 RNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 81
RN + KE+ R ++ +R+ ++ P++++ + K+Q+K + SR
Sbjct: 248 RNSQRHKERSRYHRSRSRSRHRRSRSNSPSMRKSDRKFKKSQRKSRSRSR 297
>SB_29147| Best HMM Match : TAFH (HMM E-Value=4.1)
Length = 249
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 412 SLITIVMNMKNADLNTRRIPTATAHTAKVPNTKNXVKR 299
S I + + N N+RRIP T + +PN N ++R
Sbjct: 134 SRIDALRSNNNNHKNSRRIPFVTTYNPTLPNINNIIRR 171
>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
Length = 416
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 284 RRTH-DKFSIGRTVL-VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 117
+RTH D R V V S + E KE +SK+ RKT+ K+T + RE+ +V
Sbjct: 296 KRTHYDSLFFARVVREVVSSLSVAEEKELQSKSFYRKTSTMKQTRKEYERHGRERRKV 353
>SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10)
Length = 1037
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 952 NYHKNSRRIPFVTTYNPTLPNINNIIRR 979
>SB_53153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 174 NNHKNSRRIPFVTTYNPTLPNINNIIRR 201
>SB_52647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = -3
Query: 236 SERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVN 57
S++ +E+K+K + + + + T+ P K+ + K +SSR+ S+ V+
Sbjct: 1854 SDKRDKEIKDKSHFMSSSEVSDEEMTSIGRPESITTKKSLSSTDKNTNSSSRIDMSQLVD 1913
Query: 56 P 54
P
Sbjct: 1914 P 1914
>SB_47832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 178 NNHKNSRRIPFVTTYNPTLPNINNIIRR 205
>SB_47703| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 640
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 420 NNHKNSRRIPFVTTYNPTLPNINNIIRR 447
>SB_46172| Best HMM Match : Peptidase_C54 (HMM E-Value=1)
Length = 417
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 377 NNHKNSRRIPFVTTYNPTLPNINNIIRR 404
>SB_26228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 509 NNHKNSRRIPFVTTYNPTLPNINNIIRR 536
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -3
Query: 233 ERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 99
ER +E +EKK++ + + +G+R ++E+ER + +KK
Sbjct: 504 ERKHKEEEEKKTEESYDDSWRGRRARRKAEEERKERERRERLEKK 548
>SB_22822| Best HMM Match : TAFH (HMM E-Value=2.5)
Length = 342
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 237 NNHKNSRRIPFVTTYNPTLPNINNIIRR 264
>SB_21906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_19945| Best HMM Match : TAFH (HMM E-Value=2.8)
Length = 250
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 143 NNHKNSRRIPFVTTYNPTLPNINNIIRR 170
>SB_15092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 20 NNHKNSRRIPFVTTYNPTLPNINNIIRR 47
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 434 TLXKEGYKSDYDRNEYEERGSEHQEDTDSD 345
T ++ + DY E +E +EHQ+DT +
Sbjct: 3250 TAAEDKVREDYSSEECKEESAEHQDDTSQE 3279
>SB_10973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_4050| Best HMM Match : VPEP (HMM E-Value=3.6)
Length = 569
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 111 NNHKNSRRIPFVTTYNPTLPNINNIIRR 138
>SB_53614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 108 NNHKNSRRIPFVTTYNPTLPNINNIIRR 135
>SB_52400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 36 NNHKNSRRIPFVTTYNPTLPNINNIIRR 63
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -3
Query: 236 SERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVN 57
+ + +R KEK SK + +GK T PP++ ++ + Q T +S PS
Sbjct: 3169 ASKRKRNTKEKNSKLPLPSVPEGKILTDIPPSLPSTASQIGE-QVVNTRTSSNEPSLPEA 3227
Query: 56 PA 51
PA
Sbjct: 3228 PA 3229
>SB_31385| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 303
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 565 NNHKNSRRIPFVTTYNPTLPNINNIIRR 592
>SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 424 NNHKNSRRIPFVTTYNPTLPNINNIIRR 451
>SB_25461| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 312
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_16161| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 312
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 242 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN 108
+ E ++E KEK+ + +K+ K K A P + K+ W N
Sbjct: 269 IREEWEEQERKEKERQERKQKSIKEKEVIAWPWKVGHSKDEPWHN 313
>SB_4692| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 312
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 92 NNHKNSRRIPFVTTYNPTLPNINNIIRR 119
>SB_367| Best HMM Match : GIY-YIG (HMM E-Value=7)
Length = 249
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 382 NADLNTRRIPTATAHTAKVPNTKNXVKR 299
N N+RRIP T + +PN N ++R
Sbjct: 29 NNHKNSRRIPFVTTYNPTLPNINNIIRR 56
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -3
Query: 224 QREVKEKKSKANMRKTTKGK--RTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA 51
QR K + + NMR+ + G ++ AD P QR ++ K+ +KG +++ + V PA
Sbjct: 247 QRAPKRRNWRKNMRRPSSGSIGQSMADSP--QRGTPQLSKSDRKGEKTAKGKEIKRVIPA 304
Query: 50 *RSR 39
S+
Sbjct: 305 GESK 308
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = -3
Query: 503 EDLKDELTEDXXXXXXXXKDEGLTLXKEGYKSDYDRNEYEERGSEHQEDTDSD 345
ED DE E +T KE K + E EE E QE+ D D
Sbjct: 734 EDDDDEEEESEEDESNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEEEDED 786
>SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 370 NTRRIPTATAHTAKVPNTKNXVKRKSMKNVGPTTSSPLAE 251
NT ++PT T ++P T++ + S PT SP A+
Sbjct: 591 NTTQLPTTQLPTTQMPTTQSPTAQMSTTQ-SPTAQSPTAQ 629
>SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11)
Length = 717
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 255 QNGISAERTKSKRGERKEVEGEYEKDYER 169
+ + R + +R +R+E EG+Y +DY R
Sbjct: 347 RRAVEKRRKRRQRKQRQEGEGDYGEDYNR 375
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -3
Query: 260 IGRTVLVPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 99
+G VP R RE EKK K +K K K+ ++ K+ KN+KK
Sbjct: 1 MGDVTDVPMRREYRE--EKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKK 52
>SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066)
Length = 716
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 275 HDKFSIGRTVLVPSERNQREVKEKKSKANMRK--TTKGKRTTADPPNI 138
+D F + +P E + +K+ S NMRK T G + T+D +
Sbjct: 104 YDLFQTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEV 151
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 272 DKFSIGRTVLVPSERNQREVKEKKSKANMRKTTKGKRTT 156
DKF V + E+ +++VKEKK KA + T + K T
Sbjct: 162 DKFDPDEEVKLLEEKEKQQVKEKKEKARI-NTREAKLPT 199
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 239 PSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQRE-KERVWKNQKKGTASSR 81
P E+N++E ++ ++ RKT+K K + + Q E K+ K Q + +SR
Sbjct: 260 PQEKNKQEQDKQAARQASRKTSKTKTSKPQEKDKQDEDKQAARKRQVRTRQASR 313
>SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -3
Query: 284 RRTHDKFSIGRTVLVPSERN--QREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWK 111
+R H+K T P + ++ KEKKSK KT + AD + E+ K
Sbjct: 353 KRKHEKSDEEETAATPEVESPPKKHKKEKKSKKEKTKTEESDE-EADISAVLENGEKKKK 411
Query: 110 NQKKGTASS 84
+KK A +
Sbjct: 412 KKKKKKAKT 420
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 233 ERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 117
++ +E KEK+ + K K K+ + +QR+KER+
Sbjct: 353 KQKHQEKKEKERQREKEKLEKEKQKELERKELQRQKERM 391
>SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1359
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 275 HDKFSIGRTVLVPSERNQREVKEKKSKANMRK--TTKGKRTTADPPNI 138
+D F + +P E + +K+ S NMRK T G + T+D +
Sbjct: 1109 YDLFQTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEV 1156
>SB_19628| Best HMM Match : DUF1542 (HMM E-Value=8.3)
Length = 104
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -3
Query: 284 RRTHDKFSIG--RTVLVPSERNQREVKEKKSKANMRKTTKG--KRTTADPPNIQREKERV 117
+++ D+F G + + ++ ++V + K+N+RK K +++ P + R ++R
Sbjct: 29 KKSWDQFKEGPIKRLGATTKNMAKKVALDQPKSNIRKIVKKILEQSKRWPESSGRNQKRS 88
Query: 116 WKNQKKG 96
W NQK G
Sbjct: 89 WSNQKDG 95
>SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002)
Length = 1725
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 275 HDKFSIGRTVLVPSERNQREVKEKKSKANMRK--TTKGKRTTADPPNI 138
+D F + +P E + +K+ S NMRK T G + T+D +
Sbjct: 1180 YDLFQTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEV 1227
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -3
Query: 242 VPSERNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRW 63
VP RN+ E ++S KTT + A+ + E++ V N K+ S ++ R
Sbjct: 522 VPRSRNKEETLNQQSYKFSYKTTPQESILANGSAERMEEKSVAHNPKRAQGSEEIATVRT 581
Query: 62 VNP 54
P
Sbjct: 582 PKP 584
>SB_6571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 418 DTSLITIVMNMKNADLNTRRIPTATAHTAKVPNTKNXVKR 299
+TS I + N N+RRIP T + PN + ++R
Sbjct: 79 NTSRIDALRPYNNNHKNSRRIPFVTTYNPTRPNINDIIRR 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,265,237
Number of Sequences: 59808
Number of extensions: 187779
Number of successful extensions: 1010
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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