Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0991.Seq
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.3  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.8  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   7.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 222 TCGLKTHFSSSEQCHSTHICNNGVS 296
           TC  +  FS  + C + ++C +G+S
Sbjct: 559 TCRSEGIFSDPKNCAAYYVCRSGLS 583



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 255  EQCHSTHICNNGVSLPR 305
            E C S ++C NG  +P+
Sbjct: 1216 ESCSSFYVCVNGHLVPQ 1232


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 444 KLCIILWYFFIINWHIILYLSSMNSIKLF 530
           K C I+  F +I + ++LY +S+    LF
Sbjct: 40  KNCTIVIIFHLILFAVLLYFASLEKNPLF 68


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 243 FSSSEQCHSTHICNNG 290
           F+ +EQC   + CN+G
Sbjct: 46  FADAEQCDKYYECNDG 61


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 241 TFLLRNNVIPPTSATMGS 294
           TFL+  + IPP S +M S
Sbjct: 192 TFLIPRSYIPPLSTSMRS 209


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 241 TFLLRNNVIPPTSATMGS 294
           TFL+  + IPP S +M S
Sbjct: 352 TFLIPRSYIPPLSTSMRS 369


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 241 TFLLRNNVIPPTSATMGS 294
           TFL+  + IPP S +M S
Sbjct: 352 TFLIPRSYIPPLSTSMRS 369


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 247 LLRNNVIPPTSAT 285
           L+ NN++PP S T
Sbjct: 674 LMSNNILPPESPT 686


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 363 SIDIFVGKCYV 331
           SID+++G C+V
Sbjct: 129 SIDVYLGTCFV 139


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 471 FIINWHIILYLSSMNS 518
           F++NW+  L +  MNS
Sbjct: 88  FLVNWYPRLIIGIMNS 103


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 262 VIPPTSATMGSLYQEHHDEDFF 327
           +IP  + T+  +Y  HH+ D +
Sbjct: 80  LIPKDTITIIHIYDLHHNPDIY 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,384
Number of Sequences: 336
Number of extensions: 2919
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)