Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0991.Seq
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122152-1|AAM52664.1|  121|Drosophila melanogaster LD05816p pro...   160   1e-39
AE014298-1489|AAF46617.1|  121|Drosophila melanogaster CG32672-P...   160   1e-39
AY069026-1|AAL39171.2|  158|Drosophila melanogaster AT01047p pro...   142   4e-34
AE014297-2401|AAF55459.1|  120|Drosophila melanogaster CG12334-P...   142   4e-34
AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-P...    28   8.1  
AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-P...    28   8.1  

>AY122152-1|AAM52664.1|  121|Drosophila melanogaster LD05816p
           protein.
          Length = 121

 Score =  160 bits (389), Expect = 1e-39
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = +2

Query: 17  MKFQYKEXHSFEKRKAXGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQF 196
           MKFQYKE H+FEKR+A G+KIRRKYPDRVPVIVEKAPKAR+GDLDKKKYLVPSDLTVGQF
Sbjct: 1   MKFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF 60

Query: 197 YFLIRKRIHLRPEDALFFF 253
           YFLIRKRIHLRPEDALFFF
Sbjct: 61  YFLIRKRIHLRPEDALFFF 79



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +1

Query: 244 FLLRNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 363
           F   NNVIPPTSATMGSLYQEHH+ED+FLYIA+SDENVYG
Sbjct: 77  FFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116


>AE014298-1489|AAF46617.1|  121|Drosophila melanogaster CG32672-PA
           protein.
          Length = 121

 Score =  160 bits (389), Expect = 1e-39
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = +2

Query: 17  MKFQYKEXHSFEKRKAXGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQF 196
           MKFQYKE H+FEKR+A G+KIRRKYPDRVPVIVEKAPKAR+GDLDKKKYLVPSDLTVGQF
Sbjct: 1   MKFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF 60

Query: 197 YFLIRKRIHLRPEDALFFF 253
           YFLIRKRIHLRPEDALFFF
Sbjct: 61  YFLIRKRIHLRPEDALFFF 79



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +1

Query: 244 FLLRNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 363
           F   NNVIPPTSATMGSLYQEHH+ED+FLYIA+SDENVYG
Sbjct: 77  FFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116


>AY069026-1|AAL39171.2|  158|Drosophila melanogaster AT01047p
           protein.
          Length = 158

 Score =  142 bits (343), Expect = 4e-34
 Identities = 63/81 (77%), Positives = 74/81 (91%)
 Frame = +2

Query: 11  INMKFQYKEXHSFEKRKAXGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVG 190
           ++M +QYK+ HSF+KR+  G+KIRRKYPDRVPVIVEKAPK R  +LDKKKYLVP+DLTVG
Sbjct: 39  MDMNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVG 98

Query: 191 QFYFLIRKRIHLRPEDALFFF 253
           QFYFLIRKRI+LRP+DALFFF
Sbjct: 99  QFYFLIRKRINLRPDDALFFF 119



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +1

Query: 244 FLLRNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 363
           F   NNVIPPTSATMG+LYQEH D+D+FLYI+++DENVYG
Sbjct: 117 FFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 156


>AE014297-2401|AAF55459.1|  120|Drosophila melanogaster CG12334-PA
           protein.
          Length = 120

 Score =  142 bits (343), Expect = 4e-34
 Identities = 63/81 (77%), Positives = 74/81 (91%)
 Frame = +2

Query: 11  INMKFQYKEXHSFEKRKAXGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVG 190
           ++M +QYK+ HSF+KR+  G+KIRRKYPDRVPVIVEKAPK R  +LDKKKYLVP+DLTVG
Sbjct: 1   MDMNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVG 60

Query: 191 QFYFLIRKRIHLRPEDALFFF 253
           QFYFLIRKRI+LRP+DALFFF
Sbjct: 61  QFYFLIRKRINLRPDDALFFF 81



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +1

Query: 244 FLLRNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 363
           F   NNVIPPTSATMG+LYQEH D+D+FLYI+++DENVYG
Sbjct: 79  FFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118


>AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-PA,
           isoform A protein.
          Length = 1350

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 207 SGNVFTCGLKTHFSSSEQCHSTHICNNGV 293
           +GN F C L     S+E C     C++GV
Sbjct: 867 TGNGFNCQLAAECQSAEHCGENAFCDDGV 895


>AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-PB,
           isoform B protein.
          Length = 1370

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 207 SGNVFTCGLKTHFSSSEQCHSTHICNNGV 293
           +GN F C L     S+E C     C++GV
Sbjct: 887 TGNGFNCQLAAECQSAEHCGENAFCDDGV 915


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,819,753
Number of Sequences: 53049
Number of extensions: 486601
Number of successful extensions: 1143
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)