Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0987.Seq
(564 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 129 4e-29
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 115 7e-25
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 115 7e-25
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 102 7e-21
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 91 2e-17
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 75 2e-12
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 72 8e-12
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 72 8e-12
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 72 1e-11
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 72 1e-11
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 71 2e-11
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 68 1e-10
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 62 7e-09
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 58 1e-07
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 56 4e-07
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 52 9e-06
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 51 2e-05
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 50 5e-05
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 49 9e-05
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 45 0.001
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 44 0.002
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 42 0.010
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 41 0.023
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 40 0.040
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 38 0.16
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 37 0.37
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 36 0.86
UniRef50_Q5YZ69 Cluster: Putative membrane protein; n=1; Nocardi... 34 2.6
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 3.5
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 33 3.5
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 4.6
UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3; ... 33 4.6
UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside transpo... 33 6.1
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 6.1
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 8.1
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 32 8.1
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 129 bits (312), Expect = 4e-29
Identities = 61/89 (68%), Positives = 68/89 (76%)
Frame = -2
Query: 524 SQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQK 345
+ T ++QNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKGRHCGFGKR+GTANARMP K
Sbjct: 33 ANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTK 92
Query: 344 ELWXXXXXXXXXXXXXXRTAKKIDRHLYH 258
LW R +KKIDRHLYH
Sbjct: 93 LLWMQRQRVLRRLLKKYRDSKKIDRHLYH 121
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/76 (50%), Positives = 44/76 (57%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 76
+YMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 182
Query: 75 ELLQTFAREDEAALTA 28
EL+ A+EDE A A
Sbjct: 183 ELIALHAKEDEIAAKA 198
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 115 bits (277), Expect = 7e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 29 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 88
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 89 RRMRILRRLLRRYRESKKIDRHMYHS 114
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 115 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 115 bits (277), Expect = 7e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 102 bits (244), Expect = 7e-21
Identities = 49/85 (57%), Positives = 59/85 (69%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
+++ IRK+ KD L+I+KPV VHSR+R RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 37 SRKMIRKLYKDNLIIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYH 258
R A KID+HLYH
Sbjct: 97 RRMRVLRRLLKRYREAHKIDKHLYH 121
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -1
Query: 258 LIYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
L+Y + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 122 LLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
+++++RK+IKDG +I+KPV VHSRAR RK EA+ GRH G G+R G+ ARMP KELW
Sbjct: 57 SRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWM 116
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLY 261
R KKIDRH+Y
Sbjct: 117 RRLRILRRLLRKYRADKKIDRHVY 140
Score = 49.2 bits (112), Expect = 7e-05
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+YM+AKGNVF+NKR L+E+IH+ K EK + + L++Q
Sbjct: 143 LYMRAKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 336
T++ I+++IKD ++I K SR R RK EA++KGRH G GKR GTANARMPQK++W
Sbjct: 37 TREQIKQLIKDNVIIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIW 95
Score = 32.3 bits (70), Expect = 8.1
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = -1
Query: 258 LIYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+ Y +AKG++FK++ + + I ++KA++ R K L++Q
Sbjct: 122 VFYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 72.1 bits (169), Expect = 8e-12
Identities = 33/66 (50%), Positives = 40/66 (60%)
Frame = -2
Query: 452 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKID 273
+HSRAR + A+R GRH G+GKRRGT AR+P K LW R AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 272 RHLYHS 255
+H+YHS
Sbjct: 137 KHMYHS 142
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 143 MYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 72.1 bits (169), Expect = 8e-12
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
T+++IR++IK+G++ KKPV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 37 TREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWI 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLY 261
+ KKIDR Y
Sbjct: 97 KTIRALRKELRKLKEQKKIDRRTY 120
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/84 (45%), Positives = 48/84 (57%)
Frame = -2
Query: 506 QNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 327
Q IRK+I+DGL+I KPV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 39 QLIRKLIEDGLIIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRR 95
Query: 326 XXXXXXXXXXXRTAKKIDRHLYHS 255
+KKID H+ HS
Sbjct: 96 MSILHRLLRRYCESKKIDCHMCHS 119
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 120 LYLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/89 (40%), Positives = 48/89 (53%)
Frame = -2
Query: 521 QTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKE 342
Q +++ IR +I+ ++ K + SR R+R A+R GRH G GKRRGT ARMP K
Sbjct: 34 QASSREAIRSLIESKIIAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKT 93
Query: 341 LWXXXXXXXXXXXXXXRTAKKIDRHLYHS 255
LW R +KIDRHLY +
Sbjct: 94 LWIQRQRVLRRLLSRYRDDEKIDRHLYET 122
Score = 38.3 bits (85), Expect = 0.12
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 123 LYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/88 (38%), Positives = 50/88 (56%)
Frame = -2
Query: 518 TPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKEL 339
T ++ +IRK+I+DG ++KK HSR R+R E + GRH G GKR+G+ N+R K +
Sbjct: 35 TDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLI 94
Query: 338 WXXXXXXXXXXXXXXRTAKKIDRHLYHS 255
W R + K++RHLY S
Sbjct: 95 WIIRIRVMRNLLKRLRNSSKLNRHLYRS 122
Score = 46.4 bits (105), Expect = 5e-04
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K+KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 123 LYLKSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 68.1 bits (159), Expect = 1e-10
Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 172 GLLSLLPVDVLHEHTLVLEHITLRLHVDEW-YRCLSIFLAVLYFRSNFLRTLCLCTHSSF 348
GL+ L VDVLHE+ L LE+I L + Y +++ L RS R L L +F
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH-RILILLIQVTF 123
Query: 349 CGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWT 453
GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 124 SGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 62.5 bits (145), Expect = 7e-09
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++ +IR +IK+G++ KK S ARV+K E R+KGR G G RRG A AR P KE W
Sbjct: 39 SKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWM 98
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLY 261
R + KIDR +Y
Sbjct: 99 ATIRALRKTLKQLRDSGKIDRKVY 122
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = -2
Query: 479 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 300
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 299 XXRTAKKIDRHLYHS 255
R +KKIDR +YHS
Sbjct: 563 RYRESKKIDRRMYHS 577
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = -1
Query: 249 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 580 LKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 56.4 bits (130), Expect = 4e-07
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = -2
Query: 524 SQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQK 345
S ++++R++I +G++ +P SR+R RK + KGR G G R+G+ANAR P+K
Sbjct: 38 SDAVQKEDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRK 97
Query: 344 ELW 336
W
Sbjct: 98 SRW 100
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 52.0 bits (119), Expect = 9e-06
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = -2
Query: 251 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXRPAAIK*RRHASAARNVLPPRRRN 72
T +RR MCS+T SW+TST RPA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 71 CCRPSLEKTKPR 36
R S + +PR
Sbjct: 61 SSRLSPRRKRPR 72
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 336
T+ +IR++IK G++ K P+ SR R R+ E ++KGR G G R+G AR K W
Sbjct: 36 TKDDIRELIKRGIIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQW 94
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELW 336
T+ ++R ++K+GL+ KP +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 33 TRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVW 92
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
+++++RK+I ++ KK +S R++K E KGR G G RGT AR P+K W
Sbjct: 36 SREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWI 95
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLY 261
+T KID+ Y
Sbjct: 96 SRIRALRRELRELKTNNKIDKKTY 119
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1
Query: 82 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVD 255
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L ++
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIE 108
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
T+ ++R +IK G++ P ++ + RRKGR G G+R+G A AR+ KE W
Sbjct: 38 TKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWM 97
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLY 261
R + IDR Y
Sbjct: 98 HRIRKIRRYLRYLRDKQVIDRKTY 121
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +3
Query: 273 VNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATVTTLSTCLCVFADTGAGVD 452
V LL V E+ NP +P LL + +GST L A + L + VF+ G+D
Sbjct: 77 VTLLRFLVSPEKPVQNPHPSHPGPLLGYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMD 136
Query: 453 CYRFLDDETILDHLTDVLL 509
++ LDD+ I D ++D+L+
Sbjct: 137 GHKILDDQRIFDQISDLLM 155
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 41.9 bits (94), Expect = 0.010
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Frame = -1
Query: 255 IYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 116 LYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
Score = 33.1 bits (72), Expect = 4.6
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -2
Query: 506 QNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGT 369
Q IRK+ +DGL+I+K T ARR+G H G KR+GT
Sbjct: 73 QQIRKLSEDGLIIQKSA-----------TLARRRGWHMGIRKRKGT 107
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 40.7 bits (91), Expect = 0.023
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 70 LYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 39.9 bits (89), Expect = 0.040
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -2
Query: 512 TQQNIRKMIKDG-LVIKKPVAVHSRARVRKNTEARR-KGRHCGFGKRRGTANARMPQKEL 339
T+ IR +IKDG +++ K V + S R+++ + R K G R+G AR K++
Sbjct: 37 TRDEIRNLIKDGKIIVLKKVGI-SGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQM 95
Query: 338 WXXXXXXXXXXXXXXRTAKKIDRHLY 261
W R K IDRH Y
Sbjct: 96 WVKRVRKIRAYLKWLRDHKVIDRHTY 121
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 37.9 bits (84), Expect = 0.16
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -2
Query: 509 QQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 336
++ I + K ++IKK + S R + ++ G G G+R+GT NAR K LW
Sbjct: 37 RKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKILW 94
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 36.7 bits (81), Expect = 0.37
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 336
T+ ++R +I GL+ +P SR R R ++KGR G G R+G R ++E W
Sbjct: 34 TKDDVRALIDQGLIWAEPERGVSRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAW 89
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 35.5 bits (78), Expect = 0.86
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEK 175
++MK KG V+KNK VLME +H+ E+
Sbjct: 65 MFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q5YZ69 Cluster: Putative membrane protein; n=1; Nocardia
farcinica|Rep: Putative membrane protein - Nocardia
farcinica
Length = 249
Score = 33.9 bits (74), Expect = 2.6
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 88 GNTFLAALACLLYFIAAGLSLVAKHLRPG-LLSLLPVDVLHEHTLVLEHITLRLHVDEWY 264
G+ LA +A + G S+ A L G L++ L V+++H + +H + W
Sbjct: 88 GSAVLAIVAVFAGLLVVGTSVSAPRLLAGGLITGLAVNIMHYAGMNAVRFQGEIHYNRWL 147
Query: 265 RCLSIFLAVLYFRSNFLRTLCL 330
LS+ +AV+ L TL L
Sbjct: 148 VALSVLIAVVAATVALLFTLIL 169
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 33.5 bits (73), Expect = 3.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 130 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVDE 258
I G S++A+ RPG P+DV+ + T+ + TL H E
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGE 93
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 33.5 bits (73), Expect = 3.5
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 509 QQNIRKMIKDGLVIKKPVAVHSRARVRK 426
+QNI K++KD +I+KP +HS++ R+
Sbjct: 48 RQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 4.6
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 249 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 745
Score = 33.1 bits (72), Expect = 4.6
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 DVLHEHTLVLEHITLRLHVDEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF-CGIRALAV 372
DV H +L E + D W+ C ++F+ + + N +C C HS GIR L
Sbjct: 14 DVCHRISLFSERVGAMR--DAWFSCRTLFIFLFFKYINIYIYICFCMHSRVGAGIRDLQF 71
Query: 373 PL 378
L
Sbjct: 72 SL 73
>UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside
transporter 1 (Equilibrative nitrobenzylmercaptopurine
riboside-sensitive nucleoside transporter)
(Equilibrative NBMPR-sensitive nucleoside transporter)
(Nucleoside transporter, es-type) (Solute carrier family
29 member 1).; n=3; Deuterostomia|Rep: Equilibrative
nucleoside transporter 1 (Equilibrative
nitrobenzylmercaptopurine riboside-sensitive nucleoside
transporter) (Equilibrative NBMPR-sensitive nucleoside
transporter) (Nucleoside transporter, es-type) (Solute
carrier family 29 member 1). - Takifugu rubripes
Length = 415
Score = 32.7 bits (71), Expect = 6.1
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Frame = +1
Query: 94 TFLAALACLLYFIA---AGLSLVAKHLRPGLLSL-LPVDVLHEHTLV----LEHITLRLH 249
T+ +AC L F AG SL A +RPG+ S+ LPV V V L ++ R +
Sbjct: 285 TYFIPVACFLLFNMMDWAGRSLTAVCMRPGIDSIWLPVLVAARLVFVPLFMLCNVQPRYY 344
Query: 250 V------DEWYRCLSIFLAVLYFRSNFLRTLCLC 333
+ D WY IF + F + +L +LC+C
Sbjct: 345 LPVFFSHDAWYIIFMIFFS---FSNGYLASLCMC 375
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 32.7 bits (71), Expect = 6.1
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 76 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 234
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 40 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 183
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = -1
Query: 474 RHQETCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EK 376
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,542,322
Number of Sequences: 1657284
Number of extensions: 11190059
Number of successful extensions: 32335
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 31291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32309
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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