Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0987.Seq
(564 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 115 1e-25
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 115 1e-25
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 115 1e-25
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 115 1e-25
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 115 1e-25
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 115 1e-25
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 115 1e-25
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 115 1e-25
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 115 1e-25
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 115 1e-25
BC046145-1|AAH46145.1| 369|Homo sapiens LOC339047 protein protein. 31 3.7
BC039707-1|AAH39707.1| 232|Homo sapiens LOC339047 protein protein. 31 3.7
AK131085-1|BAC85135.1| 576|Homo sapiens FLJ00286 protein protein. 31 3.7
AF132984-1|AAD34394.1| 350|Homo sapiens nuclear pore complex in... 31 3.7
AB075516-1|BAE45761.1| 158|Homo sapiens putative protein produc... 31 3.7
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein. 29 8.5
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai... 29 8.5
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai... 29 8.5
AK131084-1|BAC85134.1| 829|Homo sapiens FLJ00285 protein protein. 29 8.5
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 46 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 105
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 106 RRMRILRRLLRRYRESKKIDRHMYHS 131
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 132 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 167
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 18 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 77
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 78 RRMRILRRLLRRYRESKKIDRHMYHS 103
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 104 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 139
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 115 bits (277), Expect = 1e-25
Identities = 54/86 (62%), Positives = 63/86 (73%)
Frame = -2
Query: 512 TQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 333
++Q IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96
Query: 332 XXXXXXXXXXXXXRTAKKIDRHLYHS 255
R +KKIDRH+YHS
Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHS 122
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = -1
Query: 255 IYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 148
+Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC046145-1|AAH46145.1| 369|Homo sapiens LOC339047 protein protein.
Length = 369
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 560 EGVVGSKMKSMRSQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 381
+G + ++ RS Q+ I+ +++D + + V RA++RK + RH
Sbjct: 79 DGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKING 138
Query: 380 RRGTANARM 354
+R TA +
Sbjct: 139 KRKTAKEHL 147
>BC039707-1|AAH39707.1| 232|Homo sapiens LOC339047 protein protein.
Length = 232
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 560 EGVVGSKMKSMRSQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 381
+G + ++ RS Q+ I+ +++D + + V RA++RK + RH
Sbjct: 79 DGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKING 138
Query: 380 RRGTANARM 354
+R TA +
Sbjct: 139 KRKTAKEHL 147
>AK131085-1|BAC85135.1| 576|Homo sapiens FLJ00286 protein protein.
Length = 576
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 560 EGVVGSKMKSMRSQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 381
+G + ++ RS Q+ I+ +++D + + V RA++RK + RH
Sbjct: 423 DGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKING 482
Query: 380 RRGTANARM 354
+R TA +
Sbjct: 483 KRKTAKEHL 491
>AF132984-1|AAD34394.1| 350|Homo sapiens nuclear pore complex
interacting protein NPIP protein.
Length = 350
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 560 EGVVGSKMKSMRSQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 381
+G + ++ RS Q+ I+ +++D + + V RA++RK + RH
Sbjct: 79 DGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKING 138
Query: 380 RRGTANARM 354
+R TA +
Sbjct: 139 KRKTAKEHL 147
>AB075516-1|BAE45761.1| 158|Homo sapiens putative protein product
of Nbla00537 protein.
Length = 158
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 560 EGVVGSKMKSMRSQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 381
+G + ++ RS Q+ I+ +++D + + V RA++RK + RH
Sbjct: 55 DGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKING 114
Query: 380 RRGTANARM 354
+R TA +
Sbjct: 115 KRKTAKEHL 123
>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
Length = 1516
Score = 29.5 bits (63), Expect = 8.5
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +1
Query: 16 CLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPV 195
CL S K GF F L + L G+ L C I L+ + K PGL ++LP+
Sbjct: 866 CLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNC--KEIIENLAKILKR-HPGLRNILPI 922
Query: 196 DVLHEHTLVLEH 231
+ EH
Sbjct: 923 TTAKVPIVKFEH 934
>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1645
Score = 29.5 bits (63), Expect = 8.5
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +1
Query: 16 CLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPV 195
CL S K GF F L + L G+ L C I L+ + K PGL ++LP+
Sbjct: 994 CLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNC--KEIIENLAKILKR-HPGLRNILPI 1050
Query: 196 DVLHEHTLVLEH 231
+ EH
Sbjct: 1051 TTAKVPIVKFEH 1062
>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1644
Score = 29.5 bits (63), Expect = 8.5
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +1
Query: 16 CLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPV 195
CL S K GF F L + L G+ L C I L+ + K PGL ++LP+
Sbjct: 994 CLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNC--KEIIENLAKILKR-HPGLRNILPI 1050
Query: 196 DVLHEHTLVLEH 231
+ EH
Sbjct: 1051 TTAKVPIVKFEH 1062
>AK131084-1|BAC85134.1| 829|Homo sapiens FLJ00285 protein protein.
Length = 829
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = -2
Query: 560 EGVVGSKMKSMRSQTPTQQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 381
+G + ++ RS Q+ I+ +++D + + V RA++RK + RH
Sbjct: 676 DGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKING 735
Query: 380 RRGTANARM 354
++ TA +
Sbjct: 736 KKKTAKEHL 744
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,088,982
Number of Sequences: 237096
Number of extensions: 1907191
Number of successful extensions: 3817
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3807
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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