Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0986.Seq
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.60 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   1.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   1.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.8  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   3.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 190 NDQLVPN*NSMVRPVATPRAKLIPKSLPQKRVISR*I-VLPVTT*MVSIIASKKISPRVR 14
           N+QL  +  + +RPVA P  + IP       +++  + V P T    S    ++++P   
Sbjct: 55  NNQLFTHHKAPIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSKD 114

Query: 13  GTNK 2
            ++K
Sbjct: 115 ASSK 118


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 128 FCSWRGYRPDHG 163
           F SW  YRPD+G
Sbjct: 28  FASWTIYRPDNG 39


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 128 FCSWRGYRPDHG 163
           F SW  YRPD+G
Sbjct: 28  FASWTIYRPDNG 39


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 128 FCSWRGYRPDHG 163
           F SW  YRPD+G
Sbjct: 27  FTSWTIYRPDNG 38


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 362 QRDLNRTPPATSPAGAGIYSAVASRRRTARQR 267
           Q D+  T   + P G      VA  RR AR+R
Sbjct: 31  QDDILLTKKKSKPGGKTAPQPVAVARRNARER 62


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -2

Query: 428 CRYQNA-HRSGIASXRWHSISTTQRDLNRT 342
           C   NA H +GI   +W      +RD  RT
Sbjct: 187 CLKGNAKHWTGIFQKKWRGYEDFRRDFLRT 216


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 344 TPPATSPAGAGIYSAVASRRRT 279
           TPP+  P    +  +V+SR+R+
Sbjct: 231 TPPSGEPGNGPLDLSVSSRKRS 252


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  IFLLAIMETIYVVTGKTI 83
           IF LAI+  +Y++  KT+
Sbjct: 247 IFPLAILIIVYILIAKTL 264


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 425 RYQNAHRSGI 396
           RY NAH SGI
Sbjct: 55  RYMNAHLSGI 64


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 14  PYPGADFFAGY 46
           P+PG  FF G+
Sbjct: 364 PFPGYPFFGGF 374


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 128 FCSWRGYRPDHG 163
           F SW GYR   G
Sbjct: 30  FASWAGYRNGEG 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,646
Number of Sequences: 336
Number of extensions: 3532
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)