Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0985.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.1  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 299 FNLFFCAFSQHACQDQCRLF 358
           FN       +HAC + CR+F
Sbjct: 266 FNTVLELMPKHACSEYCRVF 285


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/21 (28%), Positives = 10/21 (47%)
 Frame = -2

Query: 447  EYEHRWQTQGYVCDDGYQRCW 385
            ++  +W   G   D  Y +CW
Sbjct: 1505 QFLEKWNFDGLDLDWEYPKCW 1525


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 317 AFSQHACQDQCRLF 358
           +FS+HA  D CR +
Sbjct: 168 SFSRHAHPDDCRKY 181


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 317 AFSQHACQDQCRLF 358
           +FS+HA  D CR +
Sbjct: 168 SFSRHAHPDDCRKY 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,629
Number of Sequences: 336
Number of extensions: 1790
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)