Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0985.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    60   3e-11
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    25   1.1  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   4.4  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   4.4  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   4.4  

>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 60.5 bits (140), Expect = 3e-11
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 174 LREDLERLKKIRALRGMRHYWGLRVRGQH 88
           LREDLERLK+I A RGMRHYWGLRVRGQH
Sbjct: 1   LREDLERLKRIHAHRGMRHYWGLRVRGQH 29


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = +3

Query: 405 HRKHNLAFAIDVRIHDTKNMLKLVWNDQATF 497
           H+   + FAI+    D ++  +++W+D++ F
Sbjct: 38  HKNARVLFAIEHMFFDEEDWRRVLWSDESKF 68


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 435 RWQTQGYVCDDGY 397
           RW   GYVCDDG+
Sbjct: 787 RW---GYVCDDGF 796


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 174 LREDLERLKKIRALRGMRHYWGLRV-RGQH 88
           +   L+R  KI  L  +R+Y G+R+ RGQ+
Sbjct: 641 IENTLKRHFKITTLGDVRNYLGIRIERGQN 670


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 435 RWQTQGYVCDDGY 397
           RW   GYVCDDG+
Sbjct: 786 RW---GYVCDDGF 795


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,494
Number of Sequences: 2352
Number of extensions: 7026
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)