Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0984.Seq
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    25   1.7  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    25   2.2  
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    24   3.0  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   3.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   3.9  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   6.8  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   6.8  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   6.8  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   9.0  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.0  

>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 107 IGFKSRMLRGQCRPRKFSCWSTSTTSGSK 193
           +G K  +  GQC P+++ C   +   G+K
Sbjct: 38  LGCKPILEEGQCCPKRYQCPELTDRDGNK 66


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 446 KNTYYYYYINHKTTD 490
           +N YYYYY N +  D
Sbjct: 198 QNCYYYYYYNEEEDD 212


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 311 LEENHIVSKTVSFVTYIIPVYFK 379
           ++  H+V ++ + VTY++ VY K
Sbjct: 55  VDNGHVVWESYAIVTYLVEVYGK 77


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 200 AGHRRRSKSVLFPTHADGVD 259
           A  RRRSKS L  +H +G D
Sbjct: 521 ASSRRRSKSFLSKSHRNGKD 540


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +2

Query: 170 TSTTSGSKIQAGHRRRSKSVLFPTHAD-GVDKIL 268
           TS T  S   +GHR     VLFP     G  KIL
Sbjct: 375 TSPTGPSGPGSGHRSHDSFVLFPRKVKVGQSKIL 408


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
 Frame = +2

Query: 410 FYT---MTYDVDQ*AKNTYYYYYI 472
           FYT   + Y+ +    N YYYY++
Sbjct: 216 FYTEEYLNYNTEDIGLNAYYYYFM 239


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
 Frame = +2

Query: 410 FYT---MTYDVDQ*AKNTYYYYYI 472
           FYT   + Y+ +    N YYYY++
Sbjct: 216 FYTEEYLNYNTEDIGLNAYYYYFM 239


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
 Frame = +2

Query: 410 FYT---MTYDVDQ*AKNTYYYYYI 472
           FYT   + Y+ +    N YYYY++
Sbjct: 216 FYTEEYLNYNTEDIGLNAYYYYFM 239


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 312 KRRTCVSHLLKNLAARILSTPSACV 238
           K R C  ++   +AA +L  P++CV
Sbjct: 576 KSRACFGYVGPIIAALVLFRPASCV 600


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 231 CFQHTRTVLTRSSLPNS*GD 290
           CF++ R V++   LP+S G+
Sbjct: 260 CFENVRNVISAYELPDSDGN 279


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 26  LQNHRVFLVKFIKNLY 73
           LQN  +F  +F+K LY
Sbjct: 594 LQNRTIFTGRFVKELY 609


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,225
Number of Sequences: 2352
Number of extensions: 11442
Number of successful extensions: 69
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)