Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0984.Seq
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB051481-1|BAB21785.1| 757|Homo sapiens KIAA1694 protein protein. 38 0.032
AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein. 30 4.8
EF025894-1|ABJ98522.1| 2721|Homo sapiens zonadhesin isoform 6 pr... 30 6.4
AY046055-6|AAL04412.1| 2601|Homo sapiens zonadhesin splice varia... 30 6.4
AY046055-5|AAL04415.1| 2689|Homo sapiens zonadhesin splice varia... 30 6.4
AY046055-4|AAL04414.1| 2624|Homo sapiens zonadhesin splice varia... 30 6.4
AY046055-3|AAL04410.1| 2724|Homo sapiens zonadhesin splice varia... 30 6.4
AY046055-2|AAL04411.1| 2812|Homo sapiens zonadhesin splice varia... 30 6.4
AY046055-1|AAL04413.1| 2721|Homo sapiens zonadhesin splice varia... 30 6.4
AF332980-1|AAK01436.1| 2721|Homo sapiens zonadhesin variant 6 pr... 30 6.4
AF332979-1|AAK01435.1| 2601|Homo sapiens zonadhesin variant 5 pr... 30 6.4
AF332978-1|AAK01434.1| 2624|Homo sapiens zonadhesin variant 4 pr... 30 6.4
AF332977-1|AAK01433.1| 2812|Homo sapiens zonadhesin variant 3 pr... 30 6.4
AF332976-1|AAK01432.1| 2689|Homo sapiens zonadhesin variant 2 pr... 30 6.4
AF332975-1|AAK01431.1| 2724|Homo sapiens zonadhesin variant 1 pr... 30 6.4
AF312032-9|AAK21011.1| 915|Homo sapiens zonadhesin protein. 30 6.4
>AB051481-1|BAB21785.1| 757|Homo sapiens KIAA1694 protein protein.
Length = 757
Score = 37.5 bits (83), Expect = 0.032
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 254 VDKILAAKFLRRWETHVLRLEENHIVSKT 340
+ KIL +KFLRRWE H L L +N + S T
Sbjct: 56 LSKILTSKFLRRWEPHHLTLADNSLASAT 84
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 192 RYKLATEGALRVCCFQHTRTVLTR 263
RYKL EG ++VC +H RT L++
Sbjct: 35 RYKLLQEGDIQVCVIRHPRTFLSK 58
>AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein.
Length = 2379
Score = 30.3 bits (65), Expect = 4.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCY 354
CQ L+ G C S G KP + N FC+
Sbjct: 2114 CQALQAFGATCQSQGLKPPLWRNSSFCH 2141
>EF025894-1|ABJ98522.1| 2721|Homo sapiens zonadhesin isoform 6
protein.
Length = 2721
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AY046055-6|AAL04412.1| 2601|Homo sapiens zonadhesin splice variant 5
protein.
Length = 2601
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AY046055-5|AAL04415.1| 2689|Homo sapiens zonadhesin splice variant 2
protein.
Length = 2689
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AY046055-4|AAL04414.1| 2624|Homo sapiens zonadhesin splice variant 4
protein.
Length = 2624
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AY046055-3|AAL04410.1| 2724|Homo sapiens zonadhesin splice variant 1
protein.
Length = 2724
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AY046055-2|AAL04411.1| 2812|Homo sapiens zonadhesin splice variant 3
protein.
Length = 2812
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AY046055-1|AAL04413.1| 2721|Homo sapiens zonadhesin splice variant 6
protein.
Length = 2721
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF332980-1|AAK01436.1| 2721|Homo sapiens zonadhesin variant 6
protein.
Length = 2721
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF332979-1|AAK01435.1| 2601|Homo sapiens zonadhesin variant 5
protein.
Length = 2601
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF332978-1|AAK01434.1| 2624|Homo sapiens zonadhesin variant 4
protein.
Length = 2624
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF332977-1|AAK01433.1| 2812|Homo sapiens zonadhesin variant 3
protein.
Length = 2812
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF332976-1|AAK01432.1| 2689|Homo sapiens zonadhesin variant 2
protein.
Length = 2689
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF332975-1|AAK01431.1| 2724|Homo sapiens zonadhesin variant 1
protein.
Length = 2724
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 2181 CQALQAFGATCQSQGLKPPLWRNSSFCPL 2209
>AF312032-9|AAK21011.1| 915|Homo sapiens zonadhesin protein.
Length = 915
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 271 CQILEEMGDACSSFGRKPHCF*NGEFCYL 357
CQ L+ G C S G KP + N FC L
Sbjct: 372 CQALQAFGATCQSQGLKPPLWRNSSFCPL 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,490,035
Number of Sequences: 237096
Number of extensions: 1624488
Number of successful extensions: 6337
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6336
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -