Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0984.Seq
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060990-1|AAL28538.1|  461|Drosophila melanogaster HL01082p pro...    31   1.1  
AF135119-1|AAD31715.1|  763|Drosophila melanogaster fat-spondin ...    31   1.1  
AE013599-2411|AAM68494.2|  628|Drosophila melanogaster CG6953-PB...    31   1.1  
AE013599-2409|AAF57910.1|  763|Drosophila melanogaster CG6953-PA...    31   1.1  

>AY060990-1|AAL28538.1|  461|Drosophila melanogaster HL01082p
           protein.
          Length = 461

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 131 RGQCRPRKFSCWSTSTTSGSKIQAGHRRRSKSVLFPTHAD 250
           R +CR   +S WS  + S  K   G R RS+  L+P  AD
Sbjct: 121 RAECRVGDYSAWSPCSVSCGK---GIRMRSRQYLYPAAAD 157


>AF135119-1|AAD31715.1|  763|Drosophila melanogaster fat-spondin
           protein.
          Length = 763

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 131 RGQCRPRKFSCWSTSTTSGSKIQAGHRRRSKSVLFPTHAD 250
           R +CR   +S WS  + S  K   G R RS+  L+P  AD
Sbjct: 423 RAECRVGDYSAWSPCSVSCGK---GIRMRSRQYLYPAAAD 459


>AE013599-2411|AAM68494.2|  628|Drosophila melanogaster CG6953-PB,
           isoform B protein.
          Length = 628

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 131 RGQCRPRKFSCWSTSTTSGSKIQAGHRRRSKSVLFPTHAD 250
           R +CR   +S WS  + S  K   G R RS+  L+P  AD
Sbjct: 288 RAECRVGDYSAWSPCSVSCGK---GIRMRSRQYLYPAAAD 324


>AE013599-2409|AAF57910.1|  763|Drosophila melanogaster CG6953-PA,
           isoform A protein.
          Length = 763

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 131 RGQCRPRKFSCWSTSTTSGSKIQAGHRRRSKSVLFPTHAD 250
           R +CR   +S WS  + S  K   G R RS+  L+P  AD
Sbjct: 423 RAECRVGDYSAWSPCSVSCGK---GIRMRSRQYLYPAAAD 459


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,073,059
Number of Sequences: 53049
Number of extensions: 464794
Number of successful extensions: 948
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)