Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0983.Seq
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 146 7e-36
03_01_0547 + 4093196-4093657,4094267-4095148 146 7e-36
03_01_0544 + 4082528-4082989,4083585-4084466 146 7e-36
03_01_0543 + 4076981-4077442,4078145-4079026 146 7e-36
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 95 3e-20
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 93 2e-19
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 93 2e-19
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 89 1e-18
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 88 5e-18
02_04_0462 + 23131433-23132836 62 2e-10
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 62 3e-10
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.18
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.24
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 32 0.24
03_05_0511 + 25056018-25059107 32 0.32
02_04_0148 - 20198407-20201424 31 0.42
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.42
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 31 0.42
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.55
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.55
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 31 0.55
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.73
01_06_0662 + 30987187-30987277,30987825-30990214 31 0.73
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 30 1.3
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 30 1.3
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.3
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 29 2.2
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 3.0
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 28 5.2
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 5.2
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 28 5.2
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 27 6.8
07_03_1359 - 25985936-25986083,25986424-25986782,25987026-259871... 27 6.8
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 27 6.8
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 27 6.8
01_01_0016 - 88825-90411 27 6.8
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 27 9.0
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 27 9.0
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 27 9.0
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 27 9.0
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 146 bits (355), Expect = 7e-36
Identities = 68/82 (82%), Positives = 74/82 (90%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQ+I N
Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153
Score = 137 bits (331), Expect = 6e-33
Identities = 64/70 (91%), Positives = 65/70 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERG 252
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 146 bits (355), Expect = 7e-36
Identities = 68/82 (82%), Positives = 74/82 (90%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQ+I N
Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153
Score = 137 bits (331), Expect = 6e-33
Identities = 64/70 (91%), Positives = 65/70 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERG 252
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 146 bits (355), Expect = 7e-36
Identities = 68/82 (82%), Positives = 74/82 (90%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQ+I N
Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153
Score = 137 bits (331), Expect = 6e-33
Identities = 64/70 (91%), Positives = 65/70 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERG 252
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 146 bits (355), Expect = 7e-36
Identities = 68/82 (82%), Positives = 74/82 (90%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQ+I N
Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153
Score = 137 bits (331), Expect = 6e-33
Identities = 64/70 (91%), Positives = 65/70 (92%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERG 252
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 95.1 bits (226), Expect = 3e-20
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T ++ FET TI+DAPGH+ ++ NMI+G SQAD VL++ A GEFE G + G
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 77
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREH LLA TLGV +L+V +N
Sbjct: 78 QTREHVLLAKTLGVSKLVVVIN 99
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 92.7 bits (220), Expect = 2e-19
Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKN- 431
T +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 312 TMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
Query: 432 ----GQTREHALLAFTLGVKQLIVGVN 500
GQT+EHA L + GV+QLIV VN
Sbjct: 372 GKSVGQTKEHAQLIRSFGVEQLIVAVN 398
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERERG 252
ERERG
Sbjct: 306 ERERG 310
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 92.7 bits (220), Expect = 2e-19
Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKN- 431
T +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 312 TMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
Query: 432 ----GQTREHALLAFTLGVKQLIVGVN 500
GQT+EHA L + GV+QLIV VN
Sbjct: 372 GKSVGQTKEHAQLIRSFGVEQLIVAVN 398
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERERG 252
ERERG
Sbjct: 306 ERERG 310
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 89.4 bits (212), Expect = 1e-18
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGI 422
T ++ FET TI+DAP GH+ ++ NMI+G SQAD VL++ A GEFE G
Sbjct: 59 TVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGY 118
Query: 423 SKNGQTREHALLAFTLGVKQLIVGVN 500
K GQTREH LLA TLGV +LIV +N
Sbjct: 119 EKGGQTREHVLLAKTLGVAKLIVVIN 144
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/54 (40%), Positives = 38/54 (70%)
Frame = +1
Query: 91 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 252
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKG 57
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 87.8 bits (208), Expect = 5e-18
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKN- 431
T + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N
Sbjct: 299 TMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGING 358
Query: 432 -GQTREHALLAFTLGVKQLIVGVNTNGSL 515
GQT+EH+ L + GV LIV VN S+
Sbjct: 359 IGQTKEHSQLVRSFGVDNLIVVVNKMDSV 387
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 187 MGKGSFKYAWVLDKLKAERERG 252
+GKGSF YAW +D+ ERERG
Sbjct: 276 IGKGSFAYAWAMDESADERERG 297
>02_04_0462 + 23131433-23132836
Length = 467
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T + A ++ET + +D PGH D++KNMITG +Q D A+L+V G
Sbjct: 120 TINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 172
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QT+EH LLA +GV +++V +N
Sbjct: 173 QTKEHILLAKQVGVPKIVVFLN 194
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 198
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +3
Query: 276 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREHAL 455
++ET+K + +D PGH D++KNMITG +Q D +L+V A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 456 LAFTLGVKQLIVGVN 500
LA +GV L+ +N
Sbjct: 177 LARQVGVPSLVCFLN 191
Score = 34.7 bits (76), Expect = 0.045
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 198
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREHAL 455
Y V IID PGH DF + D A+L++ + G I+ + Q R + +
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
Y I+D PGH +F M AD AVL+V A G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/62 (40%), Positives = 29/62 (46%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 247 RG 252
RG
Sbjct: 103 RG 104
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 282 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
+ Y + +ID PGH DF + + A+L+V A G
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG 170
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 189
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 261 DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
D AL FE + Y + +ID+PGH DF + D A+++V G
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVVDCIEG 134
Score = 30.3 bits (65), Expect = 0.97
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
++Y + +ID+PGH DF + D A+++V G
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEG 134
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
++Y + +ID+PGH DF + D A+++V G
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEG 134
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 31.1 bits (67), Expect = 0.55
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
+ID PGH+ F G+S D A+L+V G
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVVDIMRG 521
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 61 HINIVVIGHVDSGKSTTTGHLIYKCG 138
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
++Y + +ID+PGH DF + D A+++V G
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEG 134
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
+T +D PGH F G + D VL+V A G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
+ID PGH F G+S D A+L+V G
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVVDIMHG 798
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
Y + +ID PGH DF + + + A+L+V A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
+V+ +D PGH + M+ G + D A+L++ A
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
+ID PGH F G S D AV++V G
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVVDIMHG 539
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 188 WVKDPSNMLGYWTN*RLSVSVVYN 259
W+ PS+ +GYW N +S +N
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFN 899
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 55 KTHINIVVIGHVDSG 99
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
+ID PGH F G+ D A+L+V G
Sbjct: 417 LIDTPGHETFRNFRCIGSRLCDIAILVVDVILG 449
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 27.5 bits (58), Expect = 6.8
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 130 KCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGXQXILLSGSSK---LASTM 300
KC I + F K+A + W + KLK + + IL GS+ L +T+
Sbjct: 302 KCMDISQAEFFPFSKKAIFLQNDVLNAIWSIQKLKKGDLKLLRAILCQGSNDEMLLKTTV 361
Query: 301 LPSLMLLDTEISSRT*SQEPLRLIALCSSXLPVPVNSKL 417
L+ E E LR IALC+ +P+ K+
Sbjct: 362 RRYLIDCLFECDEGDLPDEALRAIALCNQ---MPLRQKI 397
>07_03_1359 -
25985936-25986083,25986424-25986782,25987026-25987153,
25987609-25987727,25988253-25988320
Length = 273
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/95 (20%), Positives = 42/95 (44%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
+ +N G G+ +G + KC + I K E+E + K + + + + L+
Sbjct: 4 RDRVNAAAAGGGGEGRLVQSGIVNKKCDKKAPKRIHKSEREKLKRDKQNDLFNELGNLLE 63
Query: 235 AERERGXQXILLSGSSKLASTMLPSLMLLDTEISS 339
+R+ + +L ++++ +L + L E SS
Sbjct: 64 PDRQNNGKACVLGETTRILKDLLSQVESLRKENSS 98
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 422 DXSFEFTGTGXYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 288
D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGVAM-GQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 139 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGXQXILLSGSSKL 288
G+ I EKE +E+ + AWV+ L A +RG I+L G L
Sbjct: 263 GVLNAIIASLEKEDEELAT---EVAWVVVYLSALSDRGISLIVLRGLGNL 309
>01_01_0016 - 88825-90411
Length = 528
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 491 YDELFDTEGESEQGMLTGLXVLRDXSFEFTGTGXYDEHSA 372
YD F + +G+L L V+ F+ TGT D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>06_03_1457 -
30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 337 MKSLCPGASMMVT*YLLVSNFQRAISIVXHAHAQPLVCPIPKHI*RILYP 188
+ S CPG + +T +V+ FQRA+ + Q +C K I + P
Sbjct: 291 LHSSCPGYIVAITASDIVNVFQRAVHTSRSSELQVAMCNAYKRIVELCSP 340
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 274 QRAISIVXHAHAQPLVCPIPKHI*RILYPFPGPPSRTS 161
+RA + A A+P + P+P+ +PFP P R +
Sbjct: 342 ERAAAGSRRARARPSIPPLPRRACPSSWPFPTSPKRAA 379
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 422 DXSFEFTGTGXYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 288
D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 327 DRLIHFSGV-EMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 368
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 320 WTQRFHQEHDHRNLSG*LRCAHRXCXYR 403
WT + H R+L LR AHR C R
Sbjct: 2 WTAAGRRLHQQRDLHAILRTAHRRCCTR 29
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,605,438
Number of Sequences: 37544
Number of extensions: 240807
Number of successful extensions: 630
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -