Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0983.Seq
(518 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 165 2e-43
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 165 2e-43
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 163 7e-43
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 161 3e-42
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 31 0.007
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.82
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 1.9
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.5
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 7.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 7.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 7.6
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 165 bits (401), Expect = 2e-43
Identities = 79/82 (96%), Positives = 79/82 (96%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV A TGEFEAGISKNG
Sbjct: 15 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 74
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQLIVGVN
Sbjct: 75 QTREHALLAFTLGVKQLIVGVN 96
Score = 31.9 bits (69), Expect = 0.004
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 214 WVLDKLKAERERG 252
WVLDKLKAERERG
Sbjct: 1 WVLDKLKAERERG 13
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 165 bits (401), Expect = 2e-43
Identities = 79/82 (96%), Positives = 79/82 (96%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV A TGEFEAGISKNG
Sbjct: 72 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQLIVGVN
Sbjct: 132 QTREHALLAFTLGVKQLIVGVN 153
Score = 150 bits (363), Expect = 1e-38
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERG 252
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 163 bits (397), Expect = 7e-43
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +3
Query: 261 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQT 440
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV A TGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 441 REHALLAFTLGVKQLIVGVN 500
REHALLAFTLGVKQLIVGVN
Sbjct: 61 REHALLAFTLGVKQLIVGVN 80
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 161 bits (392), Expect = 3e-42
Identities = 77/82 (93%), Positives = 78/82 (95%)
Frame = +3
Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434
T DIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV A GEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLIVGVN 500
QTREHALLAFTLGVKQLIVGVN
Sbjct: 132 QTREHALLAFTLGVKQLIVGVN 153
Score = 150 bits (363), Expect = 1e-38
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERG 252
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.007
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404
VT +D PGH FI G D VL+V A G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.35
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKST 108
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.82
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 64 INIVVIGHVDSGKST 108
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 56 FSLPIFG*SRITNCV*Y 6
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,331
Number of Sequences: 438
Number of extensions: 2343
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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