BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0983.Seq (518 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 146 6e-36 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 146 6e-36 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 146 6e-36 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 146 6e-36 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 94 6e-20 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 87 5e-18 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 2e-10 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 60 7e-10 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 34 0.066 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.087 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.087 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.12 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.15 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 32 0.27 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 32 0.27 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 31 0.35 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 31 0.35 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.61 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.61 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 31 0.61 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 31 0.61 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 0.81 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 0.81 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 0.81 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 0.81 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 0.81 At5g13650.2 68418.m01585 elongation factor family protein contai... 27 7.6 At5g13650.1 68418.m01584 elongation factor family protein contai... 27 7.6 At5g06810.1 68418.m00770 mitochondrial transcription termination... 27 7.6 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 146 bits (355), Expect = 6e-36 Identities = 68/82 (82%), Positives = 74/82 (90%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434 T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLAFTLGVKQLIVGVN 500 QTREHALLAFTLGVKQ+I N Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153 Score = 134 bits (324), Expect = 3e-32 Identities = 63/70 (90%), Positives = 64/70 (91%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERG 252 DKLKAERERG Sbjct: 61 DKLKAERERG 70 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 146 bits (355), Expect = 6e-36 Identities = 68/82 (82%), Positives = 74/82 (90%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434 T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLAFTLGVKQLIVGVN 500 QTREHALLAFTLGVKQ+I N Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153 Score = 134 bits (324), Expect = 3e-32 Identities = 63/70 (90%), Positives = 64/70 (91%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERG 252 DKLKAERERG Sbjct: 61 DKLKAERERG 70 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 146 bits (355), Expect = 6e-36 Identities = 68/82 (82%), Positives = 74/82 (90%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434 T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLAFTLGVKQLIVGVN 500 QTREHALLAFTLGVKQ+I N Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153 Score = 134 bits (324), Expect = 3e-32 Identities = 63/70 (90%), Positives = 64/70 (91%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERG 252 DKLKAERERG Sbjct: 61 DKLKAERERG 70 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 146 bits (355), Expect = 6e-36 Identities = 68/82 (82%), Positives = 74/82 (90%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434 T DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLAFTLGVKQLIVGVN 500 QTREHALLAFTLGVKQ+I N Sbjct: 132 QTREHALLAFTLGVKQMICCCN 153 Score = 134 bits (324), Expect = 3e-32 Identities = 63/70 (90%), Positives = 64/70 (91%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERG 252 DKLKAERERG Sbjct: 61 DKLKAERERG 70 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 93.9 bits (223), Expect = 6e-20 Identities = 44/82 (53%), Positives = 55/82 (67%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434 T ++ FET TI+DAPGH+ ++ NMI+G SQAD VL++ A GEFE G + G Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225 Query: 435 QTREHALLAFTLGVKQLIVGVN 500 QTREH LA TLGV +LIV VN Sbjct: 226 QTREHVQLAKTLGVSKLIVVVN 247 Score = 70.1 bits (164), Expect = 8e-13 Identities = 29/67 (43%), Positives = 48/67 (71%) Frame = +1 Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231 +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157 Query: 232 KAERERG 252 + ER +G Sbjct: 158 EEERLKG 164 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 87.4 bits (207), Expect = 5e-18 Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 1/83 (1%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISK-N 431 T +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG Sbjct: 304 TMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLK 363 Query: 432 GQTREHALLAFTLGVKQLIVGVN 500 GQTREHA + GV+Q+IV +N Sbjct: 364 GQTREHARVLRGFGVEQVIVAIN 386 Score = 81.8 bits (193), Expect = 3e-16 Identities = 34/65 (52%), Positives = 48/65 (73%) Frame = +1 Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237 + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297 Query: 238 ERERG 252 ERERG Sbjct: 298 ERERG 302 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 62.5 bits (145), Expect = 2e-10 Identities = 32/82 (39%), Positives = 47/82 (57%) Frame = +3 Query: 255 TXDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNG 434 T + A ++ET + +D PGH D++KNMITG +Q D A+L+V G Sbjct: 129 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 181 Query: 435 QTREHALLAFTLGVKQLIVGVN 500 QT+EH LLA +GV ++V +N Sbjct: 182 QTKEHILLAKQVGVPDMVVFLN 203 Score = 39.1 bits (87), Expect = 0.002 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 40 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 174 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 60.5 bits (140), Expect = 7e-10 Identities = 30/75 (40%), Positives = 44/75 (58%) Frame = +3 Query: 276 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREHAL 455 ++ET+K + +D PGH D++KNMITG +Q D +L+V G QT+EH L Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176 Query: 456 LAFTLGVKQLIVGVN 500 LA +GV L+ +N Sbjct: 177 LARQVGVPSLVCFLN 191 Score = 32.7 bits (71), Expect = 0.15 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 49 KEKTHINIVVIGHVDSGKSTTT 114 + K H+N+ IGHVD GK+T T Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 33.9 bits (74), Expect = 0.066 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 Y + +ID+PGH DF + T +D A+++V A G Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 Score = 32.7 bits (71), Expect = 0.15 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGG 141 NI ++ HVD GK+T HLI GG Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 33.5 bits (73), Expect = 0.087 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +3 Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 + Y I+D PGH +F M AD AVLIV A G Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 33.5 bits (73), Expect = 0.087 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +3 Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 + Y I+D PGH +F M AD AVLIV A G Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 33.1 bits (72), Expect = 0.12 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 Query: 282 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 E S Y + +ID PGH DF + S A+L+V A G Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171 Score = 27.9 bits (59), Expect = 4.3 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 31 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 150 D K EK N +I H+D GKST L+ G I K Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 32.7 bits (71), Expect = 0.15 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +1 Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCG 138 K + NI ++ H+D+GK+TTT ++Y G Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 31.9 bits (69), Expect = 0.27 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREH 449 Y V IID PGH DF + D A+L++ + G I+ + Q R + Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 Score = 27.9 bits (59), Expect = 4.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144 NI + H+DSGK+T T +++ G I Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 31.9 bits (69), Expect = 0.27 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREH 449 Y V IID PGH DF + D A+L++ + G I+ + Q R + Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 Score = 27.9 bits (59), Expect = 4.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144 NI + H+DSGK+T T +++ G I Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 31.5 bits (68), Expect = 0.35 Identities = 20/78 (25%), Positives = 35/78 (44%) Frame = +3 Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREHALLAF 464 T + +V+ +D PGH + M+ G + D A+L++ A QT EH Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177 Query: 465 TLGVKQLIVGVNTNGSLN 518 + +K +I+ N +N Sbjct: 178 MMRLKHIIILQNKIDLIN 195 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 31.5 bits (68), Expect = 0.35 Identities = 20/78 (25%), Positives = 35/78 (44%) Frame = +3 Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREHALLAF 464 T + +V+ +D PGH + M+ G + D A+L++ A QT EH Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177 Query: 465 TLGVKQLIVGVNTNGSLN 518 + +K +I+ N +N Sbjct: 178 MMRLKHIIILQNKIDLIN 195 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 30.7 bits (66), Expect = 0.61 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +3 Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 +E + + + +ID PGH DF + + + A+L+V A G Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188 Score = 28.3 bits (60), Expect = 3.3 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 165 N +I H+D GKST L+ G + R +++ Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 30.7 bits (66), Expect = 0.61 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 +T +D PGH F + G + D VL+V A G Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 30.7 bits (66), Expect = 0.61 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +3 Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 ++Y + +ID+PGH DF + D A+++V G Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEG 134 Score = 29.1 bits (62), Expect = 1.9 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138 N+ VI HVD GKST T L+ G Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 30.7 bits (66), Expect = 0.61 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +3 Query: 279 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTRE 446 FE SK +V+ +D PGH + M+ G + D A+L++ A QT E Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165 Query: 447 HALLAFTLGVKQLIV 491 H + +K +I+ Sbjct: 166 HLAAVEIMQLKHIII 180 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 30.3 bits (65), Expect = 0.81 Identities = 18/65 (27%), Positives = 30/65 (46%) Frame = +3 Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTGEFEAGISKNGQTREHALLAFTLGV 476 +V+ +D PGH + M+ G + D A+LI+ A QT EH + + Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173 Query: 477 KQLIV 491 K +I+ Sbjct: 174 KDIII 178 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 30.3 bits (65), Expect = 0.81 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 +ID PGH F G+S D A+L+V G Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVVDITHG 145 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 30.3 bits (65), Expect = 0.81 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 +ID PGH F G+S D A+L+V G Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVVDIMHG 804 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 30.3 bits (65), Expect = 0.81 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 +ID PGH F G+S D A+L+V G Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVVDIKHG 737 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 30.3 bits (65), Expect = 0.81 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 + +ID PGH F G++ D A+L+V G Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRG 592 >At5g13650.2 68418.m01585 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 676 Score = 27.1 bits (57), Expect = 7.6 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 V IID PGH DF + + D +L+V + G Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182 >At5g13650.1 68418.m01584 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 675 Score = 27.1 bits (57), Expect = 7.6 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAXTG 404 V IID PGH DF + + D +L+V + G Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181 >At5g06810.1 68418.m00770 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF Length = 1141 Score = 27.1 bits (57), Expect = 7.6 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 Query: 118 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGXQXILLS 273 H + G+D + I K KEA+E+ S++ + K+KA + G + LS Sbjct: 174 HHVLCYSGVDPKRIGKIFKEAREV--FSYETGVLASKIKAYEDLGFSRLFLS 223 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,983,167 Number of Sequences: 28952 Number of extensions: 186700 Number of successful extensions: 552 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 516 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 549 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 947539968 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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