Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0980.Seq
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   3.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   6.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   8.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   8.0  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    22   8.0  

>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 174 NCRWMIHFHHDCRNCIHKCCYRR 106
           NCR     +H  RN   + CY++
Sbjct: 151 NCRTAARRNHSSRNTCRRNCYQQ 173


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = -3

Query: 198 LCL--HQCYWNCRWMIHFHHDCRN 133
           +CL  HQ    C  +   HH+CRN
Sbjct: 684 ICLPCHQECRGCHGLGDDHHECRN 707


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -1

Query: 263 HHHVGTVSISAATAGCTGSCQVCACISVTGT 171
           HHH      S  T     +  V AC + T T
Sbjct: 18  HHHSSQSPTSTTTVTMATASPVPACTTTTST 48


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -1

Query: 263 HHHVGTVSISAATAGCTGSCQVCACISVTGT 171
           HHH      S  T     +  V AC + T T
Sbjct: 18  HHHSSQSPTSTTTVTMATASPVPACTTTTST 48


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 198 LCLHQCYW 175
           +C+HQCY+
Sbjct: 60  MCIHQCYY 67



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 84 LCLHQCYW 61
          +C+HQCY+
Sbjct: 60 MCIHQCYY 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,492
Number of Sequences: 2352
Number of extensions: 6206
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)