Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0980.Seq
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 33 0.079
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 32 0.14
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 32 0.14
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 29 0.74
U00066-7|AAY86272.1| 80|Caenorhabditis elegans Hypothetical pr... 29 0.98
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 1.7
U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protei... 27 3.0
U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protei... 27 3.0
AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-... 27 3.0
U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase... 27 5.2
AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinas... 27 5.2
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 26 9.1
AF016663-2|AAC70876.1| 149|Caenorhabditis elegans Hypothetical ... 26 9.1
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 26 9.1
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 26 9.1
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.079
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = +1
Query: 16 TVPTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQA 195
T PT + P P T+ T P P T PT + P P T+
Sbjct: 251 TTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST 308
Query: 196 QTWQDPVHPAVAALMDTVPT 255
T P P T PT
Sbjct: 309 PT--TPTTPTTMKSTPTTPT 326
Score = 30.3 bits (65), Expect = 0.42
Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 TVPTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQA 195
T PT + P P T+ T P P T PT + P P T+
Sbjct: 365 TTPTTMKSTPTTPTTPTTMKSTPTT--PTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKST 422
Query: 196 QTWQDPVH--PAVAALMDTVPT 255
T + P + M + PT
Sbjct: 423 PTTPTTMKSTPTTPSTMKSSPT 444
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 97 PVHPAVAALMDTVPTVVMEVYHP-PAVPVTLMQAQTWQDPV 216
P+HP +AA+ T +M V HP P +P+ +Q+ Q P+
Sbjct: 203 PMHPQMAAMAATFNPGLMVVSHPVPVIPIPSNSSQSSQPPM 243
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 97 PVHPAVAALMDTVPTVVMEVYHP-PAVPVTLMQAQTWQDPV 216
P+HP +AA+ T +M V HP P +P+ +Q+ Q P+
Sbjct: 203 PMHPQMAAMAATFNPGLMVVSHPVPVIPIPSNSSQSSQPPM 243
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 29.5 bits (63), Expect = 0.74
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 195 CLHQCYWNCRWMIHFHHDCRNC 130
C C+W CR + HH C NC
Sbjct: 58 CFIVCFW-CRCFMDVHHRCPNC 78
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 81 CLHQCYWNCRWMIHFHHDCWNC 16
C C+W CR + HH C NC
Sbjct: 58 CFIVCFW-CRCFMDVHHRCPNC 78
>U00066-7|AAY86272.1| 80|Caenorhabditis elegans Hypothetical
protein R12B2.8 protein.
Length = 80
Score = 29.1 bits (62), Expect = 0.98
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 246 CIHKCCYRRMYWILP 202
C ++CCYR YW+ P
Sbjct: 45 CDNECCYRLRYWVYP 59
Score = 26.6 bits (56), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 132 CIHKCCYRRMYWI 94
C ++CCYR YW+
Sbjct: 45 CDNECCYRLRYWV 57
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 PTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQT 201
PT V P VP T P + T PT + P PV + T
Sbjct: 481 PTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNPTSSTT 540
Query: 202 WQD-PVHPAVAALMDTVP 252
PV+P TVP
Sbjct: 541 APTAPVNPTSPTTAPTVP 558
>U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protein
11, isoform b protein.
Length = 106
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 22 PTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAV 174
P M V P VPV Q + P++P+V ++ PT +Y P V
Sbjct: 44 PPPPMIVPQPQIVPVVQQIMQPMVQPIYPSVQPIV--YPTATPIIYTQPEV 92
>U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protein
11, isoform a protein.
Length = 232
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 22 PTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAV 174
P M V P VPV Q + P++P+V ++ PT +Y P V
Sbjct: 170 PPPPMIVPQPQIVPVVQQIMQPMVQPIYPSVQPIV--YPTATPIIYTQPEV 218
>AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-11
protein.
Length = 232
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 22 PTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAV 174
P M V P VPV Q + P++P+V ++ PT +Y P V
Sbjct: 170 PPPPMIVPQPQIVPVVQQIMQPMVQPIYPSVQPIV--YPTATPIIYTQPEV 218
>U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase c
protein 3 protein.
Length = 597
Score = 26.6 bits (56), Expect = 5.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 144 DCRNCIHKCCYRRM 103
DCR C+HK C+R +
Sbjct: 160 DCRLCVHKKCHRHV 173
>AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinase
C3 protein.
Length = 597
Score = 26.6 bits (56), Expect = 5.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 144 DCRNCIHKCCYRRM 103
DCR C+HK C+R +
Sbjct: 160 DCRLCVHKKCHRHV 173
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 25 TVVMEVYHPPAVPVTLMQAQTLQDPVHPA 111
T V++V PP V L L++P+H A
Sbjct: 506 TTVLDVATPPPVSAELQILNQLEEPLHKA 534
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 249 NCIHKCCYRRMYWILPGLCLHQCYWNCRWMIHFHHDCRNCIHKCCYR 109
N H C ++I+PG C +HDC+N H+ C R
Sbjct: 854 NQAHALCAGCHHFIMPGSSTLSC---------LYHDCKNVYHRECTR 891
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 25 TVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMD---TVPTVVMEVYHPP 168
T ++ P A+P+ ++ Q+ +DP PA + T P + + Y P
Sbjct: 523 TTIITTVKPNALPIAIVAKQSEKDPACPAEWTQFNTNATAPALCFKRYEKP 573
>AF016663-2|AAC70876.1| 149|Caenorhabditis elegans Hypothetical
protein F21E9.3 protein.
Length = 149
Score = 25.8 bits (54), Expect = 9.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 159 IHFHHDCRNCIHKCCYRRMYW 97
+ +HDC + HK C +R++W
Sbjct: 93 LKIYHDCNDGNHK-CQKRLFW 112
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 201 GLCLHQCYWNCRWMIHFHHDCRNCIHKC 118
GLC +C + H +CR C+ KC
Sbjct: 463 GLCSDKCPDGYQINPDDHRECRKCVGKC 490
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 201 GLCLHQCYWNCRWMIHFHHDCRNCIHKC 118
GLC +C + H +CR C+ KC
Sbjct: 460 GLCSDKCPDGYQINPDDHRECRKCVGKC 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,095,855
Number of Sequences: 27780
Number of extensions: 144574
Number of successful extensions: 392
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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