Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0979.Seq
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 58 3e-08
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 58 3e-08
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 58 3e-08
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 58 3e-08
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 58 3e-08
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 58 3e-08
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 58 3e-08
BC010017-1|AAH10017.1| 292|Homo sapiens Unknown (protein for IM... 42 0.002
BC000953-1|AAH00953.1| 552|Homo sapiens RIO kinase 2 (yeast) pr... 33 0.91
AK002021-1|BAA92040.1| 552|Homo sapiens protein ( Homo sapiens ... 32 1.6
BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein. 31 2.8
AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens ... 31 2.8
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 352 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 24 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 69
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 25 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 70
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 110 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 155
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 352 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 352 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 57.6 bits (133), Expect = 3e-08
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPT 120
AAET RNIN AFG GT NERTV++WFK+F G+ L++ R GRP+
Sbjct: 352 AAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPS 397
>BC010017-1|AAH10017.1| 292|Homo sapiens Unknown (protein for
IMAGE:2819902) protein.
Length = 292
Score = 41.5 bits (93), Expect = 0.002
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRF 168
A ET RNIN G GT NE V++WFK+F
Sbjct: 200 AVETLRNINNTLGPGTANEHIVQWWFKKF 228
Score = 33.9 bits (74), Expect = 0.39
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = -1
Query: 147 EELTTWKTHHLNNTELKEMVEADPSQTTQELAAWFN 40
E+ + W + ++N +LK ++EADP +TTQE+A N
Sbjct: 238 EKHSVWPSE-VDNDQLKALIEADPVKTTQEVAQELN 272
>BC000953-1|AAH00953.1| 552|Homo sapiens RIO kinase 2 (yeast)
protein.
Length = 552
Score = 32.7 bits (71), Expect = 0.91
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 331 FLNQTRKMNIPKIRMIFDYEFRRRTKLQKQLAISMLHLERGLVMNAPCDFGLNAFVMEIL 152
F N K + K R + + R K+ A ER + P D+ +A VME++
Sbjct: 132 FRNLKNKRDYHKYRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAVVMELI 191
Query: 151 ----I*RTNHVEDPPS 116
+ + +HVEDP S
Sbjct: 192 NGYPLCQIHHVEDPAS 207
>AK002021-1|BAA92040.1| 552|Homo sapiens protein ( Homo sapiens
cDNA FLJ11159 fis, clone PLACE1006966. ).
Length = 552
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 331 FLNQTRKMNIPKIRMIFDYEFRRRTKLQKQLAISMLHLERGLVMNAPCDFGLNAFVMEIL 152
F N K + K R + + R K+ A ER + P D+ +A VME++
Sbjct: 132 FRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAVVMELI 191
Query: 151 ----I*RTNHVEDPPS 116
+ + +HVEDP S
Sbjct: 192 NGYPLCQIHHVEDPAS 207
>BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein.
Length = 254
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -2
Query: 311 DEYSENSNDF*LRVPTQN*AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR 132
D Y E V A+ET + A+G + V W KRF++G D+++ R
Sbjct: 3 DRYLEQRISIKFCVKLNKSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDAR 62
Query: 131 -GRP 123
GRP
Sbjct: 63 SGRP 66
>AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ37770 fis, clone BRHIP2025448. ).
Length = 210
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -2
Query: 311 DEYSENSNDF*LRVPTQN*AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR 132
D Y E V A+ET + A+G + V W KRF++G D+++ R
Sbjct: 3 DRYLEQRISIKFCVKLNKSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDAR 62
Query: 131 -GRP 123
GRP
Sbjct: 63 SGRP 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,058,902
Number of Sequences: 237096
Number of extensions: 1487342
Number of successful extensions: 2745
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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