Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0979.Seq
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 39 0.002
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 38 0.005
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 37 0.011
AL033510-2|CAA22065.1| 281|Caenorhabditis elegans Hypothetical ... 33 0.14
Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical pr... 32 0.25
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 32 0.25
Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z81054-8|CAB02886.3| 341|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z92786-3|CAB63202.1| 488|Caenorhabditis elegans Hypothetical pr... 31 0.75
AL032663-9|CAA21764.2| 187|Caenorhabditis elegans Hypothetical ... 31 0.75
Z81116-4|CAB03304.1| 372|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical p... 29 2.3
Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83219-6|CAB05696.5| 351|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical pr... 28 4.0
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 5.3
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 28 5.3
Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical pr... 27 7.0
U42438-1|AAN84876.1| 459|Caenorhabditis elegans Maternal effect... 27 7.0
U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical p... 27 7.0
AF016224-1|AAC27121.1| 459|Caenorhabditis elegans WD-40 repeat ... 27 7.0
Z81147-4|CAB03529.1| 578|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRP 123
A E RNI A G+G + T + WF++F++G+F L+ R GRP
Sbjct: 25 AMEAERNICGAMGEGALSYNTAKSWFQKFKNGDFSLEEIERSGRP 69
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -2
Query: 248 ETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRP 123
E RNI A G+G + T + WF++F++G+F L+ R GRP
Sbjct: 2 EAERNICGAMGEGALSYNTAKSWFQKFKNGDFSLEEIERSGRP 44
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRP 123
A E RNI A G+G + T + WF++ ++G+F L+ R GRP
Sbjct: 25 AMEAERNICGAMGEGALSYNTAKSWFQKLKNGDFSLEEIERSGRP 69
>AL033510-2|CAA22065.1| 281|Caenorhabditis elegans Hypothetical
protein Y40H7A.2 protein.
Length = 281
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -2
Query: 254 AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDLKN*P 135
A E RNI A G+G + T + WF++ NFDLKN P
Sbjct: 25 AMEAERNICGAMGEGALSYNTAKSWFQKL-FFNFDLKNMP 63
>Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical
protein F47H4.7 protein.
Length = 553
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 248 ETARNINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
E N G G + R+ FWF RFR GN DL
Sbjct: 79 EAFENFCGKVGNGVIDLRSFEFWFNRFRTGNHDL 112
>Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical
protein F47H4.9 protein.
Length = 569
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 218 GKGTGNERTVRFWFKRFRDGNFDL 147
G G + R+ FWF RFR GN DL
Sbjct: 106 GNGVIDLRSFEFWFNRFRTGNHDL 129
>Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical
protein C38D9.6 protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 239 RNINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
RN G G + R+ FWF RFR GN DL
Sbjct: 38 RNFCNKVGNGVIDFRSFGFWFDRFRTGNHDL 68
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -2
Query: 218 GKGTGNERTVRFWFKRFRDGNFDLKN*PR-GRPTI 117
G + + T++FWF++ + N+DL + PR GRP +
Sbjct: 6 GDNSVSYNTMKFWFEKIKKKNYDLDDKPRSGRPRL 40
>Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical
protein F47H4.4 protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 248 ETARNINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
E N G G + R+ FWF RFR GN DL
Sbjct: 80 EAYENFCRKVGNGVIDFRSFGFWFDRFRTGNHDL 113
>Z81054-8|CAB02886.3| 341|Caenorhabditis elegans Hypothetical
protein F01D4.7 protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 343 LLFFFLNQTRKMNIP-KIRMIFDYEFRRRTKLQKQLAISMLH-LERGLVMNAPCD 185
+++FFLN + + I+++F ++F LAIS H L L+ N PCD
Sbjct: 43 IIYFFLNYSNLLAFHFNIKILFFFQFCSCFLQSATLAISQTHHLVLALIANGPCD 97
>Z92786-3|CAB63202.1| 488|Caenorhabditis elegans Hypothetical
protein F47H4.6 protein.
Length = 488
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 218 GKGTGNERTVRFWFKRFRDGNFDL 147
G G + R+ FWF RF+ GN DL
Sbjct: 53 GNGVIDFRSFEFWFNRFQTGNHDL 76
>AL032663-9|CAA21764.2| 187|Caenorhabditis elegans Hypothetical
protein Y75B12B.1 protein.
Length = 187
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 236 NINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
N FG + R FW +RF DGN DL
Sbjct: 32 NFCSTFGNDIMHNREFEFWHRRFYDGNHDL 61
>Z81116-4|CAB03304.1| 372|Caenorhabditis elegans Hypothetical
protein T06C12.4 protein.
Length = 372
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 248 ETARNINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
E+ +N GK FWF RFR+GN DL
Sbjct: 28 ESYKNFCRKVGKDAMTHYDFDFWFYRFREGNHDL 61
>Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical
protein F44G3.12 protein.
Length = 345
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 218 GKGTGNERTVRFWFKRFRDGNFDL 147
G G + + +FWF+RF+ GN D+
Sbjct: 38 GAGAMSFQEFKFWFERFQSGNHDM 61
>Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical
protein F36D1.3 protein.
Length = 329
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 505 FCTYFSIFSISVGNFILLRPRNFRKKIFERN 413
FCT F+ FSI++ + +R F+KK F RN
Sbjct: 207 FCTLFT-FSINITMMVKVRHILFQKKFFNRN 236
>Z83219-6|CAB05696.5| 351|Caenorhabditis elegans Hypothetical
protein C31C9.4 protein.
Length = 351
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 290 NDF*LRVPTQN*AAETARNINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
ND L++P + E+ + AFG R WF RF +GN DL
Sbjct: 18 NDALLKLPIE----ESFKKFCDAFGDELMEYREFELWFYRFYNGNLDL 61
>Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical
protein T03F7.6 protein.
Length = 237
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 514 KIAFCTYFSIFSISVGNFILLRPRNFRKKIFERNFFQIVPVRF 386
K F FS +S+ I RN +KKIF + FQ+V F
Sbjct: 54 KSMFSVIFSTIFVSILYLISFIVRNTKKKIFHQTRFQLVMYLF 96
>Z67884-1|CAA91807.1| 347|Caenorhabditis elegans Hypothetical
protein T14G8.2 protein.
Length = 347
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 90 VEADPSQTTQELAAWFNVILPTILTYLRQI 1
V DP ++T L W N+I P ++T L +
Sbjct: 315 VHVDPEKSTFTLIGWENIISPRLMTALSNL 344
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 65 VVWL-GSASTISFNSVLFRWWVFHVVSSSNQNFHHESV*TKIARCVHYQSPFQMQH*YCE 241
V+WL G S + ++ FHV N +++E K A + +SP + + Y
Sbjct: 70 VLWLNGGPGCSSLDGLIEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESPAGVGYSYST 129
Query: 242 LFLQLSSASELVIKNH 289
F S E+ + N+
Sbjct: 130 NFNLTVSDDEVSLHNY 145
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 407 SNSTCEVLLLKKCATFDYRLSVAFFFFKPDKKDEYSENSND 285
SN L C T R S+AF + +DEY EN D
Sbjct: 290 SNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDEYPENILD 330
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 407 SNSTCEVLLLKKCATFDYRLSVAFFFFKPDKKDEYSENSND 285
SN L C T R S+AF + +DEY EN D
Sbjct: 290 SNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDEYPENILD 330
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 407 SNSTCEVLLLKKCATFDYRLSVAFFFFKPDKKDEYSENSND 285
SN L C T R S+AF + +DEY EN D
Sbjct: 290 SNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDEYPENILD 330
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 407 SNSTCEVLLLKKCATFDYRLSVAFFFFKPDKKDEYSENSND 285
SN L C T R S+AF + +DEY EN D
Sbjct: 290 SNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDEYPENILD 330
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 407 SNSTCEVLLLKKCATFDYRLSVAFFFFKPDKKDEYSENSND 285
SN L C T R S+AF + +DEY EN D
Sbjct: 314 SNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDEYPENILD 354
>Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical
protein C31C9.8 protein.
Length = 390
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 185 FWFKRFRDGNFDLKN*PRGRPTI*ITL 105
FWF RF G+FDL N R + TI TL
Sbjct: 49 FWFYRFYKGDFDL-NYDRSQETIHPTL 74
>U42438-1|AAN84876.1| 459|Caenorhabditis elegans Maternal effect
sterile protein 6 protein.
Length = 459
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 230 NVAFGKGTGNERTVRFW 180
N A KG GNE+ + FW
Sbjct: 320 NYALSKGCGNEKAIHFW 336
>U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical
protein ZK1290.9 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 251 AETARNINVAFGKGTGNERTVRFWFKRFRDGNFDL 147
AE+ +N GK +WF RF +GN DL
Sbjct: 27 AESYKNFCRKVGKDIMTLHDFDYWFYRFHNGNHDL 61
>AF016224-1|AAC27121.1| 459|Caenorhabditis elegans WD-40 repeat
protein protein.
Length = 459
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 230 NVAFGKGTGNERTVRFW 180
N A KG GNE+ + FW
Sbjct: 320 NYALSKGCGNEKAIHFW 336
>Z81147-4|CAB03529.1| 578|Caenorhabditis elegans Hypothetical
protein T09E11.5 protein.
Length = 578
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 56 NSWVVWLGSASTISFNSVLFRWWVF 130
+S + +L S +++SFNSV R W F
Sbjct: 179 SSLIYYLASHTSVSFNSVFARSWQF 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,025,467
Number of Sequences: 27780
Number of extensions: 270065
Number of successful extensions: 807
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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