BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0978.Seq (560 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY745234-1|AAU93513.1| 96|Anopheles gambiae thioredoxin-depend... 92 1e-20 AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.42 AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 24 3.9 AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 6.8 AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 6.8 >AY745234-1|AAU93513.1| 96|Anopheles gambiae thioredoxin-dependent peroxidase protein. Length = 96 Score = 91.9 bits (218), Expect = 1e-20 Identities = 48/77 (62%), Positives = 54/77 (70%) Frame = +1 Query: 289 LAWINTPRKQGGLGPMNIPLISDKXHRIXRDYGVLDEETGIPFRGLFIIDDKQNLXLITI 468 LAWINTPRK GGLG + PL++D RI DYGVL + GI RGLFIID + ITI Sbjct: 1 LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPD-GISLRGLFIIDPAGVVRQITI 59 Query: 469 NDLPVXRSVEETLRWCK 519 NDLPV RSV+ETLR K Sbjct: 60 NDLPVGRSVDETLRLIK 76 >AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein protein. Length = 429 Score = 27.1 bits (57), Expect = 0.42 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -2 Query: 421 LGRECPSPRPALRSRGRCGATCRLSEECS 335 + REC SP ++ RCGA L+++C+ Sbjct: 373 IARECRSPVDRQKACIRCGAEGHLAKDCN 401 >AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein protein. Length = 455 Score = 23.8 bits (49), Expect = 3.9 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -2 Query: 421 LGRECPSPRPALRSRGRCGATCRLSEECS 335 L R+C SP ++ RCGA ++ C+ Sbjct: 399 LARDCQSPVDRQQACIRCGADGHYAKSCT 427 >AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium channel alpha subunitprotein. Length = 2139 Score = 23.0 bits (47), Expect = 6.8 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = -1 Query: 167 EEQHNIFPLVVRQRNVLELSVDDXRGLELGSGF 69 +E NIF ++ ++LEL ++ +GL + F Sbjct: 869 QEGWNIFDFIIVALSLLELGLEGVQGLSVLRSF 901 >AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoisomerase protein. Length = 1039 Score = 23.0 bits (47), Expect = 6.8 Identities = 12/49 (24%), Positives = 22/49 (44%) Frame = +3 Query: 351 KRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPXADHDQRPARXEVGG 497 ++Q A HLP+ ++ PR + HRR + + + + GG Sbjct: 612 QQQQARHLPQQQAIHHIHQQQYPRQVIHRRPSTSSVELSEESMDSDGGG 660 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 472,091 Number of Sequences: 2352 Number of extensions: 7872 Number of successful extensions: 18 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 52563375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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