Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0978.Seq
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    92   1e-20
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   0.42 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   3.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.8  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score = 91.9 bits (218), Expect = 1e-20
 Identities = 48/77 (62%), Positives = 54/77 (70%)
 Frame = +1

Query: 289 LAWINTPRKQGGLGPMNIPLISDKXHRIXRDYGVLDEETGIPFRGLFIIDDKQNLXLITI 468
           LAWINTPRK GGLG +  PL++D   RI  DYGVL  + GI  RGLFIID    +  ITI
Sbjct: 1   LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPD-GISLRGLFIIDPAGVVRQITI 59

Query: 469 NDLPVXRSVEETLRWCK 519
           NDLPV RSV+ETLR  K
Sbjct: 60  NDLPVGRSVDETLRLIK 76


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 421 LGRECPSPRPALRSRGRCGATCRLSEECS 335
           + REC SP    ++  RCGA   L+++C+
Sbjct: 373 IARECRSPVDRQKACIRCGAEGHLAKDCN 401


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 421 LGRECPSPRPALRSRGRCGATCRLSEECS 335
           L R+C SP    ++  RCGA    ++ C+
Sbjct: 399 LARDCQSPVDRQQACIRCGADGHYAKSCT 427


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 167 EEQHNIFPLVVRQRNVLELSVDDXRGLELGSGF 69
           +E  NIF  ++   ++LEL ++  +GL +   F
Sbjct: 869 QEGWNIFDFIIVALSLLELGLEGVQGLSVLRSF 901


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +3

Query: 351 KRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPXADHDQRPARXEVGG 497
           ++Q A HLP+ ++         PR + HRR +    +  +     + GG
Sbjct: 612 QQQQARHLPQQQAIHHIHQQQYPRQVIHRRPSTSSVELSEESMDSDGGG 660


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,091
Number of Sequences: 2352
Number of extensions: 7872
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)